RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 RAB4AP20338 218 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 SRIP30626 198 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 SLC35B1P78383 322 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 TMEM256Q8N2U0 113 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 GTSF1Q8WW33 167 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 NRGNQ92686 78 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 KCNS1Q96KK3 526 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 ASCL2Q99929 193 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 CACNA1BQ00975 2339 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 ABCA2Q9BZC7 2435 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 GRIFINA4D1Z8 144 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 TMEM189A5PLL7 270 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 SERF1AO75920 110 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 GZMBP10144 247 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 PF4V1P10720 104 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 PKIAP61925 76 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 DEFB112Q30KQ8 113 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 Q5PR19 223 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 Q6YL49 198 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 TCF24Q7RTU0 167 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 GLMPQ8WWB7 406 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 PGLYRP4Q96LB8 373 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 NOL4LQ96MY1 436 aaPredicted RBP7.11□□□□□ -1.27
HTT-205ENST00000509043 ALKBH7Q9BT30 221 aaPredicted RBP7.11□□□□□ -1.27
HTT-205ENST00000509043 SAMD10Q9BYL1 202 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 NPFFR1Q9GZQ6 430 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 VPREB3Q9UKI3 123 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 TP53TG3Q9ULZ0 132 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 TACC2O95359 2948 aa7.11□□□□□ -1.27
HTT-205ENST00000509043 MYO18BQ8IUG5 2567 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 IGHV3-35A0A0C4DH35 117 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 TRBV7-9A0A0J9YWB2 115 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 FABP5P3A8MUU1 101 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 RNF223E7ERA6 249 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 TSTD3H0UI37 97 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 APOHP02749 345 aaPredicted RBP7.1□□□□□ -1.27
HTT-205ENST00000509043 GPX1P07203 203 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 CAMPP49913 170 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 BLCAPP62952 87 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 SLAQ13239 276 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 FOXE3Q13461 319 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 FAM106AQ4KMX7 169 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 TMEM78Q5T7P6 136 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 GPHB5Q86YW7 130 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 SIGLECL1Q8N7X8 197 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 OR4X2Q8NGF9 303 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 PEF1Q9UBV8 284 aaKnown RBP7.1□□□□□ -1.27
HTT-205ENST00000509043 FLNCQ14315 2725 aa7.1□□□□□ -1.27
HTT-205ENST00000509043 IGKV2-40A0A087WW87 121 aaPredicted RBP7.09□□□□□ -1.27
HTT-205ENST00000509043 OVOL1O14753 267 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 SH2D1AO60880 128 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 ZNF324O75467 553 aaPredicted RBP7.09□□□□□ -1.27
HTT-205ENST00000509043 IGKV2D-40P01614 121 aaPredicted RBP7.09□□□□□ -1.27
HTT-205ENST00000509043 IGHV4-59P01825 116 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 ELANEP08246 267 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 FRMD6-AS1P0C7T7 363 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 PMCHP20382 165 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 PSMB8P28062 276 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 CRIP1P50238 77 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 ZNF138P52744 262 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 HIST1H1AQ02539 215 aaPredicted RBP7.09□□□□□ -1.27
HTT-205ENST00000509043 GDF5OSQ5U4N7 250 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 ZNF493Q6ZR52 646 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 C9orf47Q6ZRZ4 202 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 TMEM86BQ8N661 226 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 C18orf32Q8TCD1 76 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.27
HTT-205ENST00000509043 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
HTT-205ENST00000509043 LINC00527Q9UJ94 153 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 UFC1Q9Y3C8 167 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 ZNF462Q96JM2 2506 aa7.09□□□□□ -1.27
HTT-205ENST00000509043 ABCA1O95477 2261 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 LOC102724200A0A096LPH7 203 aaPredicted RBP7.08□□□□□ -1.28
HTT-205ENST00000509043 IGHV7-4-1A0A0J9YVY3 117 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 F2Z2F3 143 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 CTRLP40313 264 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 LINC00310P59036 64 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 KIAA1644Q3SXP7 199 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 LINC01559Q495D7 138 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 C16orf92Q96LL3 132 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 C8orf49Q96NF6 230 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 VGLL1Q99990 258 aa7.08□□□□□ -1.28
HTT-205ENST00000509043 IGHV3OR16-8A0A075B7F1 116 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 TRAV8-2A0A0B4J237 113 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 NUPR1O60356 82 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 AMTP48728 403 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 Q8N2B8 174 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 RNF152Q8N8N0 203 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 MYOZ3Q8TDC0 251 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 Q96MF0 132 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 PSMG3-AS1Q96PY0 264 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 CNFNQ9BYD5 112 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 KLK15Q9H2R5 256 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 NRN1Q9NPD7 142 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 NAGKQ9UJ70 344 aa7.07□□□□□ -1.28
HTT-205ENST00000509043 AKAP6Q13023 2319 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.28
HTT-205ENST00000509043 SPTAN1Q13813 2472 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms