RNA–Protein interactions for RNA: ENST00000508808.1

TRIM23-206, Transcript of tripartite motif containing 23, humanhuman

TSL 5

Gene TRIM23, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-206ENST00000508808 HIST1H2BDP58876 126 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 HIST1H2BCP62807 126 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 EDDM3AQ14507 147 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 NNATQ16517 81 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 MOGQ16653 247 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 HIST2H2BEQ16778 126 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.74□□□□□ -2.29
TRIM23-206ENST00000508808 C9orf64Q5T6V5 341 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 SCIMPQ6UWF3 145 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 WFDC11Q8NEX6 87 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 RASSF5Q8WWW0 418 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 H1FXQ92522 213 aaKnown RBP0.74□□□□□ -2.29
TRIM23-206ENST00000508808 SLC7A6Q92536 515 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 HIST1H2BHQ93079 126 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 HIST1H2BNQ99877 126 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 HIST1H2BMQ99879 126 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 CHST6Q9GZX3 395 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 LRTM1Q9HBL6 345 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 RSL24D1Q9UHA3 163 aaKnown RBP0.74□□□□□ -2.29
TRIM23-206ENST00000508808 TMEM56-RWDD3S4R434 201 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 OTOGQ6ZRI0 2925 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 DOCK3Q8IZD9 2030 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 PLXND1Q9Y4D7 1925 aa0.74□□□□□ -2.29
TRIM23-206ENST00000508808 PTPRQQ9UMZ3 2332 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 CFAP46Q8IYW2 2715 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 NUP210Q8TEM1 1887 aaPredicted RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 IGSF10Q6WRI0 2623 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SETD2Q9BYW2 2564 aaPredicted RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 RP1P56715 2156 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 ANKRD36CQ5JPF3 1778 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 CSMD2Q7Z408 3487 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 TRAV9-1A0A075B6T8 112 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 hCG_1818297A0A087WSY0 165 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 GNG14A0A1W2PPG7 69 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 FAM92AA1XBS5 289 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 FUOMA2VDF0 154 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 A8MT66 165 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 LINC00587B1AMM8 73 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 IBA57-AS1B1ANH7 110 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 F8W036 122 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 ARPC5O15511 151 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PDE6DO43924 150 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 CIAO1O76071 339 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 HAND1O96004 215 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 OGNP20774 298 aaKnown RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 CASP1P29466 404 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SERPINB1P30740 379 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PHBP35232 272 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 GNGT1P63211 74 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PSPHP78330 225 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SMCO1Q147U7 214 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 NEDD8Q15843 81 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 IAH1Q2TAA2 248 aaPredicted RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 C12orf74Q32Q52 190 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 CCDC58Q4VC31 144 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 TMEM97Q5BJF2 176 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 IBA57Q5T440 356 aaKnown RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 HACD4Q5VWC8 232 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 RPL22L1Q6P5R6 122 aaKnown RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 C4orf22Q6V702 233 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 C7orf65Q6ZTY9 151 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SMIM15Q7Z3B0 74 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 C12orf45Q8N5I9 185 aaPredicted RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 C15orf53Q8NAA6 179 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 ZNF439Q8NDP4 499 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 ST6GALNAC3Q8NDV1 305 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 OR51A2Q8NGJ7 313 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 OR10X1Q8NGY0 326 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 GRPEL2Q8TAA5 225 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SLC25A40Q8TBP6 338 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 MAFIPQ8WZ33 124 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 TOMM6Q96B49 74 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 CEP19Q96LK0 163 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PFDN5Q99471 154 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 C12orf57Q99622 126 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 HOPXQ9BPY8 73 aaPredicted RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 DOHHQ9BU89 302 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 COMMD5Q9GZQ3 224 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 XAGE1AQ9HD64 81 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 BATF3Q9NR55 127 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PYCARDQ9ULZ3 195 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 BAIAP2Q9UQB8 552 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 GINS2Q9Y248 185 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 FAM32AQ9Y421 112 aaKnown RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PDCD11Q14690 1871 aaKnown RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 PLXNA4Q9HCM2 1894 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 HIVEP3Q5T1R4 2406 aa0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SIPA1L3O60292 1781 aaPredicted RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 MYO18AQ92614 2054 aaKnown RBP0.73□□□□□ -2.29
TRIM23-206ENST00000508808 SPTBN2O15020 2390 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 PTPRBP23467 1997 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 EXPH5Q8NEV8 1989 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 KIAA1549Q9HCM3 1950 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 MYLKQ15746 1914 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 DENND4CQ5VZ89 1909 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CCDC171Q6TFL3 1326 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CUBNO60494 3623 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 PLXNA2O75051 1894 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CSMD1Q96PZ7 3565 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms