RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 BSNQ9UPA5 3926 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 SPENQ96T58 3664 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 SPTBN1Q01082 2364 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 DOCK9Q9BZ29 2069 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 LRRK2Q5S007 2527 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 BOD1L1Q8NFC6 3051 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 TRAV5A0A0B4J249 113 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 TRGV8A0A0C4DH27 118 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 IGLL5B9A064 214 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 TMEM150CB9EJG8 249 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 H0YGG7 62 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 H0YIG0 161 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 SCGB2A1O75556 95 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 IL4P05112 153 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 FAM106CPP0CH98 169 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 FCGR2BP31994 310 aaPredicted RBP3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 RPL8P62917 257 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 RIGQ13278 110 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 RRN3P1Q2M238 152 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 MS4A18Q3C1V0 323 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 FAM106AQ4KMX7 169 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF542PQ5EBM4 170 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 TXNDC8Q6A555 127 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 LINC00696Q6ZRV3 163 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 SLC25A48Q6ZT89 311 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 PDPNQ86YL7 162 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 Q8IYB0 196 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 CEND1Q8N111 149 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 FGFRL1Q8N441 504 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 GATD1Q8NB37 220 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 GATAD1Q8WUU5 269 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 IGF2BP2-AS1Q96M15 143 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 HSD17B10Q99714 261 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 IMUPQ9GZP8 106 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 NXF5Q9H1B4 397 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 ONECUT1Q9UBC0 465 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 PEMTQ9UBM1 199 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 CCL26Q9Y258 94 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 PCDH15Q96QU1 1955 aa3.6□□□□□ -1.83
PDLIM5-211ENST00000508531 PCNX1Q96RV3 2341 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 LOC101059948A0A1B0GTJ6 334 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 TCRBV4S1A1TA0A5B7 111 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 NCBP2LA6PVI3 153 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 HIGD1CA8MV81 97 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 A8MWV9 139 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 TNFSF12O43508 249 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SNAI2O43623 268 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 PRKNO60260 465 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 ATP5LO75964 103 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV1-5P01602 117 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 HBDP02042 147 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SLC25A5P05141 298 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SCGB1C2P0DMR2 95 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 MYOD1P15172 320 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 EDDM3BP56851 147 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 ERVK-16P61578 105 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 TFF3Q07654 80 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 WFDC2Q14508 124 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 OR1C1Q15619 314 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SLC25A53Q5H9E4 307 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 KLF17Q5JT82 389 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SERTAD4-AS1Q5TG53 156 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 HES3Q5TGS1 186 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 CFAP126Q5VTH2 177 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SPATA31B1PQ5VZV4 182 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 TRAT1Q6PIZ9 186 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 OR1L4Q8NGR5 311 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 PIGCQ92535 297 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 SGK494Q96LW2 274 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 PRELID3AQ96N28 172 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 CHAC1Q9BUX1 264 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 RTL8AQ9BWD3 113 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 CHRNA10Q9GZZ6 450 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 RPP21Q9H633 154 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 FGF22Q9HCT0 170 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 ENY2Q9NPA8 101 aa3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 CSDC2Q9Y534 153 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-211ENST00000508531 F8P00451 2351 aa3.59□□□□□ -1.84
PDLIM5-211ENST00000508531 CEP192Q8TEP8 1941 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 IGHV1OR15-9A0A0B4J2B8 117 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1D-13A0A0B4J2D9 117 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 A0A0G2JRQ6 117 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 A4D1N5 150 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 SMIM9A6NGZ8 99 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 F8WDY8 70 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 C15orf65H3BRN8 121 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 SPINK4O60575 86 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 WISP2O76076 250 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 TGFAP01135 160 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 P01737 135 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 STATHP02808 62 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 P0C879 139 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 C8orf88P0DMB2 117 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1-13P0DP09 117 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 CAMPP49913 170 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 UCNP55089 124 aa3.58□□□□□ -1.84
PDLIM5-211ENST00000508531 XGP55808 180 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms