RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
RNF4-210ENST00000508235 CYTL1Q9NRR1 136 aa10.94□□□□□ -0.66
RNF4-210ENST00000508235 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
RNF4-210ENST00000508235 ZNF705FA8MVS1 300 aaPredicted RBP10.93□□□□□ -0.66
RNF4-210ENST00000508235 BCL2L11O43521 198 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 PFDN1O60925 122 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 C1QBP02746 253 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 ZNF705DP0CH99 300 aaPredicted RBP10.93□□□□□ -0.66
RNF4-210ENST00000508235 ZNF705BP0CI00 300 aaPredicted RBP10.93□□□□□ -0.66
RNF4-210ENST00000508235 AKR1C8PQ5T2L2 129 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 RPP25LQ8N5L8 163 aaKnown RBP10.93□□□□□ -0.66
RNF4-210ENST00000508235 RAB24Q969Q5 203 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 HYLS1Q96M11 299 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 SLC35B3Q9H1N7 401 aa10.93□□□□□ -0.66
RNF4-210ENST00000508235 BOLA2-SMG1P6H3BVE0 249 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 STAG3L2P0CL84 134 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 STAG3L3P0CL85 134 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 MIFP14174 115 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 CSN1S1P47710 185 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 FXYD7P58549 80 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 ICAM4Q14773 271 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
RNF4-210ENST00000508235 GOLT1BQ9Y3E0 138 aa10.92□□□□□ -0.66
RNF4-210ENST00000508235 ZNF705EA8MWA4 302 aaPredicted RBP10.91□□□□□ -0.66
RNF4-210ENST00000508235 CXorf1O96002 111 aa10.91□□□□□ -0.66
RNF4-210ENST00000508235 TSPOP30536 169 aa10.91□□□□□ -0.66
RNF4-210ENST00000508235 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
RNF4-210ENST00000508235 TMUB2Q71RG4 321 aa10.91□□□□□ -0.66
RNF4-210ENST00000508235 MUC7Q8TAX7 377 aa10.91□□□□□ -0.66
RNF4-210ENST00000508235 PHYHIPLQ96FC7 376 aa10.91□□□□□ -0.66
RNF4-210ENST00000508235 A0A0J9YWU9 116 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 C3orf84H3BNL1 204 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 M0R3E3 92 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 HMGB3O15347 200 aaKnown RBP10.9□□□□□ -0.66
RNF4-210ENST00000508235 INSP01308 110 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 SEC11BP0C7V7 166 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 ARL14EPLP0DKL9 152 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 SPINK13Q1W4C9 94 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 ZNF705AQ6ZN79 300 aaPredicted RBP10.9□□□□□ -0.66
RNF4-210ENST00000508235 RXFP4Q8TDU9 374 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 NEU1Q99519 415 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 Q9H3A6 140 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 C11orf68Q9H3H3 251 aaKnown RBP10.9□□□□□ -0.66
RNF4-210ENST00000508235 TMEM167BQ9NRX6 74 aa10.9□□□□□ -0.66
RNF4-210ENST00000508235 CTXND1A0A1B0GTU2 59 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 PRAC2D3DTV9 90 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 NPIPB6E9PJ23 425 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 M0R2Z0 102 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 TPT1P13693 172 aaKnown RBP10.89□□□□□ -0.67
RNF4-210ENST00000508235 CDKN1BP46527 198 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 BAP18Q8IXM2 172 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 OTORQ9NRC9 128 aa10.89□□□□□ -0.67
RNF4-210ENST00000508235 UMAD1C9J7I0 102 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 GCHFRP30047 84 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 LEPP41159 167 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 EIF5AL1Q6IS14 154 aaKnown RBP10.88□□□□□ -0.67
RNF4-210ENST00000508235 ARL6IP6Q8N6S5 226 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 CMTM2Q8TAZ6 248 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 TMEM208Q9BTX3 173 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 X6R8D5 127 aa10.88□□□□□ -0.67
RNF4-210ENST00000508235 IGHV3OR16-12A0A075B7B8 117 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 PGPA6NDG6 321 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
RNF4-210ENST00000508235 LGALSLQ3ZCW2 172 aaPredicted RBP10.87□□□□□ -0.67
RNF4-210ENST00000508235 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 C9orf47Q6ZRZ4 202 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 TMEM256Q8N2U0 113 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 Q8NAQ8 132 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 STOML3Q8TAV4 291 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 SUN5Q8TC36 379 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 C20orf144Q9BQM9 153 aa10.87□□□□□ -0.67
RNF4-210ENST00000508235 IGHV4-28A0A0C4DH34 117 aa10.86□□□□□ -0.67
RNF4-210ENST00000508235 TMEM189A5PLL7 270 aa10.86□□□□□ -0.67
RNF4-210ENST00000508235 CRXO43186 299 aaPredicted RBP10.86□□□□□ -0.67
RNF4-210ENST00000508235 HBE1P02100 147 aa10.86□□□□□ -0.67
RNF4-210ENST00000508235 SLC25A5P05141 298 aaKnown RBP10.86□□□□□ -0.67
RNF4-210ENST00000508235 ZFP69Q49AA0 526 aa10.86□□□□□ -0.67
RNF4-210ENST00000508235 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
RNF4-210ENST00000508235 DNAH9Q9NYC9 4486 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 CT45A10P0DMU9 189 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 PRB4P10163 310 aaPredicted RBP10.85□□□□□ -0.67
RNF4-210ENST00000508235 ERCC8Q13216 396 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 ZNF726P1Q15940 193 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 IQCF2Q8IXL9 164 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 C1orf158Q8N1D5 194 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 TENM3Q9P273 2699 aa10.85□□□□□ -0.67
RNF4-210ENST00000508235 NBEAL2Q6ZNJ1 2754 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 IGKV2-40A0A087WW87 121 aaPredicted RBP10.84□□□□□ -0.67
RNF4-210ENST00000508235 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms