RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 CCL25O15444 150 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 LYRM1O43325 122 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 CXCL8P10145 99 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 NDUFA6P56556 154 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 SPRNQ5BIV9 151 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 KRTAP26-1Q6PEX3 210 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 ARPINQ7Z6K5 226 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 GKN2Q86XP6 184 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 SKA2Q8WVK7 121 aaPredicted RBP1.16□□□□□ -2.22
SMN1-206ENST00000507905 LINC00052Q96N35 136 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 HSPB11Q9Y547 144 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 FRMPD1Q5SYB0 1578 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 TNS3Q68CZ2 1445 aa1.15□□□□□ -2.22
SMN1-206ENST00000507905 TRPM1Q7Z4N2 1603 aa1.15□□□□□ -2.22
SMN1-206ENST00000507905 TRAV13-1A0A0B4J241 112 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 TRBV6-4A0A1B0GX49 114 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 F8W1H4 67 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 M0QZK8 103 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 M0R2N4 97 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 KLF7O75840 302 aaPredicted RBP1.15□□□□□ -2.23
SMN1-206ENST00000507905 MPV17LQ2QL34 196 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 DIRC1Q969H9 104 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 PRELID3AQ96N28 172 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 LXNQ9BS40 222 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 ORMDL1Q9P0S3 153 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 ANKRD31Q8N7Z5 1873 aa1.15□□□□□ -2.23
SMN1-206ENST00000507905 TNRC6AQ8NDV7 1962 aaKnown RBP1.15□□□□□ -2.23
SMN1-206ENST00000507905 KIAA1549Q9HCM3 1950 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 PIK3C2AO00443 1686 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 H3BMG7 143 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 INE1O15225 51 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 ANGP03950 147 aaKnown RBP1.14□□□□□ -2.23
SMN1-206ENST00000507905 FABP4P15090 132 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 IL9P15248 144 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 FOXA3P55318 350 aaPredicted RBP1.14□□□□□ -2.23
SMN1-206ENST00000507905 MRPS36P82909 103 aaKnown RBP1.14□□□□□ -2.23
SMN1-206ENST00000507905 CIRBPQ14011 172 aaKnown RBP1.14□□□□□ -2.23
SMN1-206ENST00000507905 VMA21Q3ZAQ7 101 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 TEN1Q86WV5 123 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 FAM19A2Q8N3H0 131 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 TMEM229BQ8NBD8 167 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 OR4B1Q8NGF8 309 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 PYDC1Q8WXC3 89 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 OR4C12Q96R67 309 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 C19orf12Q9NSK7 152 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 CBLN4Q9NTU7 201 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 FKBP11Q9NYL4 201 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 TPRKBQ9Y3C4 175 aa1.14□□□□□ -2.23
SMN1-206ENST00000507905 ZCCHC11Q5TAX3 1644 aaKnown RBP1.14□□□□□ -2.23
SMN1-206ENST00000507905 ZFC3H1O60293 1989 aaKnown RBP1.14□□□□□ -2.23
SMN1-206ENST00000507905 COL24A1Q17RW2 1714 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 NCOA6Q14686 2063 aaPredicted RBP1.13□□□□□ -2.23
SMN1-206ENST00000507905 TRBV27A0A0K0K1C4 114 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 LOC107984640A0A0U1RRK4 108 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 J3KT08 172 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 OR5AS1Q8N127 324 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 BRK1Q8WUW1 75 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 MCEEQ96PE7 176 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 ODF3Q96PU9 254 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 NISCHQ9Y2I1 1504 aa1.13□□□□□ -2.23
SMN1-206ENST00000507905 KDM6AO15550 1401 aaPredicted RBP1.13□□□□□ -2.23
SMN1-206ENST00000507905 CACNA1BQ00975 2339 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 CASP8AP2Q9UKL3 1982 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 UNC13CQ8NB66 2214 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 FREM3P0C091 2139 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 TRBV7-6A0A0J9YX20 115 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 LOC105371267A0A1B0GV96 52 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 ARL5CA6NH57 179 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 C5orf58C9J3I9 102 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 H3BRM9 83 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 NUPR1O60356 82 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 COX7CP15954 63 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 MAXP61244 160 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 RPS28P62857 69 aaKnown RBP1.12□□□□□ -2.23
SMN1-206ENST00000507905 MIR22HGQ0VDD5 57 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 DIAPH2-AS1Q14236 149 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 GDF5OSQ5U4N7 250 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 CCL4L1Q8NHW4 92 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 ZNF431Q8TF32 576 aaPredicted RBP1.12□□□□□ -2.23
SMN1-206ENST00000507905 PSMF1Q92530 271 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 BATF3Q9NR55 127 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 TECTAO75443 2155 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 PTPRFP10586 1907 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 MYLKQ15746 1914 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 TANC2Q9HCD6 1990 aa1.12□□□□□ -2.23
SMN1-206ENST00000507905 RFX7Q2KHR2 1363 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 MCM3APO60318 1980 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 A0A096LPI6 279 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 TPT1P13693 172 aaKnown RBP1.11□□□□□ -2.23
SMN1-206ENST00000507905 CRYGSP22914 178 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 SDC4P31431 198 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 KRTAP10-4P60372 401 aaPredicted RBP1.11□□□□□ -2.23
SMN1-206ENST00000507905 OR8B8Q15620 311 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 FOXI2Q6ZQN5 318 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 LINC00269Q8N2A0 174 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 MORN4Q8NDC4 146 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 CLEC2BQ92478 149 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 CST11Q9H112 138 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 TMEM138Q9NPI0 162 aa1.11□□□□□ -2.23
SMN1-206ENST00000507905 TMEM14CQ9P0S9 112 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms