RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 PPBPP02775 128 aa17.21■□□□□ 0.35
SPCS3-203ENST00000507678 TSPOP30536 169 aa17.21■□□□□ 0.35
SPCS3-203ENST00000507678 LMO4P61968 165 aa17.21■□□□□ 0.35
SPCS3-203ENST00000507678 SMIM15Q7Z3B0 74 aa17.21■□□□□ 0.35
SPCS3-203ENST00000507678 G3V318 75 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 M0R2Z0 102 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 CTSGP08311 255 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 PSG3Q16557 428 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 IGKV2-40A0A087WW87 121 aaPredicted RBP17.2■□□□□ 0.34
SPCS3-203ENST00000507678 IGHV3-66A0A0C4DH42 116 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 ATP6V0E1O15342 81 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 IGKV2D-40P01614 121 aaPredicted RBP17.2■□□□□ 0.34
SPCS3-203ENST00000507678 UBE2E1P51965 193 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 C15orf32Q32M92 178 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 LCN12Q6JVE5 192 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 TMEM219Q86XT9 240 aa17.2■□□□□ 0.34
SPCS3-203ENST00000507678 IGHV3OR16-13A0A075B7E8 117 aa17.19■□□□□ 0.34
SPCS3-203ENST00000507678 IGHV3-74A0A0B4J1X5 117 aa17.19■□□□□ 0.34
SPCS3-203ENST00000507678 OOSP1A8MZH6 123 aa17.19■□□□□ 0.34
SPCS3-203ENST00000507678 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
SPCS3-203ENST00000507678 HLA-DMBP28068 263 aa17.19■□□□□ 0.34
SPCS3-203ENST00000507678 VAMP3Q15836 100 aa17.19■□□□□ 0.34
SPCS3-203ENST00000507678 EBI3Q14213 229 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 CT83Q5H943 113 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 TMEM75Q8N9X5 138 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 AJUBAQ96IF1 538 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 C1RLQ9NZP8 487 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 LOC102724200A0A096LPH7 203 aaPredicted RBP17.18■□□□□ 0.34
SPCS3-203ENST00000507678 CRIP1P50238 77 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 LINC00527Q9UJ94 153 aa17.18■□□□□ 0.34
SPCS3-203ENST00000507678 PIEZO1Q92508 2521 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 MUC21A0A0G2JKD1 596 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 MUC21A0A140T8X8 626 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 ARMS2P0C7Q2 107 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 MUC21Q5SSG8 566 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 TIMM8BQ9Y5J9 83 aaPredicted RBP17.17■□□□□ 0.34
SPCS3-203ENST00000507678 CFAP46Q8IYW2 2715 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 ZNF138P52744 262 aa17.17■□□□□ 0.34
SPCS3-203ENST00000507678 NPIPB6E9PJ23 425 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 RHOGP84095 191 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 CLEC2AQ6UVW9 174 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 Q8TAT8 98 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 CLEC5AQ9NY25 188 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 RABAC1Q9UI14 185 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 IGHV3-49A0A0A0MS15 119 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 CLEC3BP05452 202 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 CSN1S1P47710 185 aa17.16■□□□□ 0.34
SPCS3-203ENST00000507678 IGHV4-39P01824 125 aa17.15■□□□□ 0.34
SPCS3-203ENST00000507678 CSN3P07498 182 aa17.15■□□□□ 0.34
SPCS3-203ENST00000507678 BRD3OSQ6XYD6 125 aa17.15■□□□□ 0.34
SPCS3-203ENST00000507678 LYPD1Q8N2G4 141 aa17.15■□□□□ 0.34
SPCS3-203ENST00000507678 S100A7AQ86SG5 101 aa17.15■□□□□ 0.34
SPCS3-203ENST00000507678 CRYBG3Q68DQ2 2970 aa17.15■□□□□ 0.34
SPCS3-203ENST00000507678 NPFFO15130 113 aa17.14■□□□□ 0.34
SPCS3-203ENST00000507678 CT45A10P0DMU9 189 aa17.14■□□□□ 0.34
SPCS3-203ENST00000507678 CLEC19AQ6UXS0 136 aa17.14■□□□□ 0.34
SPCS3-203ENST00000507678 URB1-AS1Q96HZ7 61 aa17.14■□□□□ 0.34
SPCS3-203ENST00000507678 GFRA4Q9GZZ7 299 aa17.14■□□□□ 0.34
SPCS3-203ENST00000507678 CST9LQ9H4G1 147 aa17.14■□□□□ 0.34
SPCS3-203ENST00000507678 ZNF207O43670 478 aaKnown RBP17.14■□□□□ 0.33
SPCS3-203ENST00000507678 KLF5Q13887 457 aaPredicted RBP17.14■□□□□ 0.33
SPCS3-203ENST00000507678 OCIAD2Q56VL3 154 aa17.14■□□□□ 0.33
SPCS3-203ENST00000507678 KLHDC1Q8N7A1 406 aa17.14■□□□□ 0.33
SPCS3-203ENST00000507678 RPL7P18124 248 aaKnown RBP17.14■□□□□ 0.33
SPCS3-203ENST00000507678 CENPVL3A0A0U1RRI6 287 aa17.13■□□□□ 0.33
SPCS3-203ENST00000507678 FAM181BA6NEQ2 426 aa17.13■□□□□ 0.33
SPCS3-203ENST00000507678 EBLN2Q6P2I7 272 aa17.13■□□□□ 0.33
SPCS3-203ENST00000507678 CSTL1Q9H114 145 aa17.13■□□□□ 0.33
SPCS3-203ENST00000507678 MRPS16Q9Y3D3 137 aaKnown RBP17.13■□□□□ 0.33
SPCS3-203ENST00000507678 ZNF48Q96MX3 618 aaPredicted RBP17.13■□□□□ 0.33
SPCS3-203ENST00000507678 SMAD5-AS1Q9Y6J3 95 aa17.13■□□□□ 0.33
SPCS3-203ENST00000507678 FLNCQ14315 2725 aa17.13■□□□□ 0.33
SPCS3-203ENST00000507678 A0A1B0GUT8 65 aa17.12■□□□□ 0.33
SPCS3-203ENST00000507678 TP73-AS1Q9UF72 201 aa17.12■□□□□ 0.33
SPCS3-203ENST00000507678 SOX21Q9Y651 276 aaPredicted RBP17.12■□□□□ 0.33
SPCS3-203ENST00000507678 UTP20O75691 2785 aaKnown RBP17.11■□□□□ 0.33
SPCS3-203ENST00000507678 CSMD2Q7Z408 3487 aa17.11■□□□□ 0.33
SPCS3-203ENST00000507678 ABCA2Q9BZC7 2435 aa17.11■□□□□ 0.33
SPCS3-203ENST00000507678 CELSR2Q9HCU4 2923 aa17.11■□□□□ 0.33
SPCS3-203ENST00000507678 SCGB2A1O75556 95 aa17.11■□□□□ 0.33
SPCS3-203ENST00000507678 PDE6HQ13956 83 aa17.11■□□□□ 0.33
SPCS3-203ENST00000507678 VGLL1Q99990 258 aa17.11■□□□□ 0.33
SPCS3-203ENST00000507678 APOHP02749 345 aaPredicted RBP17.11■□□□□ 0.33
SPCS3-203ENST00000507678 FAM110DQ8TAY7 271 aaPredicted RBP17.11■□□□□ 0.33
SPCS3-203ENST00000507678 TMEM238C9JI98 176 aa17.1■□□□□ 0.33
SPCS3-203ENST00000507678 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.1■□□□□ 0.33
SPCS3-203ENST00000507678 PSG9Q00887 426 aa17.1■□□□□ 0.33
SPCS3-203ENST00000507678 RNF182Q8N6D2 247 aa17.1■□□□□ 0.33
SPCS3-203ENST00000507678 ZNF502Q8TBZ5 544 aa17.1■□□□□ 0.33
SPCS3-203ENST00000507678 TRAV40A0A0B4J280 105 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 HAX1O00165 279 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 LINC00173Q6ZV60 143 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 SERTM2A0A1B0GWG4 89 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 FAM231BA6NCW3 169 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 H0Y8G0 127 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 SH2D1AO60880 128 aa17.09■□□□□ 0.33
SPCS3-203ENST00000507678 IGHV4-61A0A0C4DH41 118 aa17.08■□□□□ 0.32
SPCS3-203ENST00000507678 TRBV6-1A0A0K0K1D8 114 aa17.08■□□□□ 0.32
SPCS3-203ENST00000507678 C16orf54Q6UWD8 224 aa17.08■□□□□ 0.32
SPCS3-203ENST00000507678 CCDC140Q96MF4 163 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms