RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 PCLOQ9Y6V0 5065 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 UPK1BO75841 260 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 CT45A10P0DMU9 189 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 TAS2R60P59551 318 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 B2MP61769 119 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 NHLH2Q02577 135 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 BAXQ07812 192 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 LINC01587Q99440 93 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
HOXC4-203ENST00000507650 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 M0R3E3 92 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 PYYP10082 97 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 FGF7P21781 194 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 S100A11P31949 105 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 MZT2BQ6NZ67 158 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 S100A7AQ86SG5 101 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 S100ZQ8WXG8 99 aa11.29□□□□□ -0.6
HOXC4-203ENST00000507650 HTN1P15515 57 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 PVALBP20472 110 aaPredicted RBP11.28□□□□□ -0.6
HOXC4-203ENST00000507650 Q6ZRG5 221 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 LINC00612Q8N6U2 182 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 THAP6Q8TBB0 222 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 GPN1Q9HCN4 374 aaPredicted RBP11.28□□□□□ -0.6
HOXC4-203ENST00000507650 RNF24Q9Y225 148 aa11.28□□□□□ -0.6
HOXC4-203ENST00000507650 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 H2BFSP57053 126 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 ERCC8Q13216 396 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 RAB31Q13636 194 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 LINC00336Q6ZUF6 198 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 STX12Q86Y82 276 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 C16orf74Q96GX8 76 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 PFDN5Q99471 154 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 SLC25A2Q9BXI2 301 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
HOXC4-203ENST00000507650 TMEM14CQ9P0S9 112 aa11.27□□□□□ -0.61
HOXC4-203ENST00000507650 J3KRW8 73 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 ZNF253O75346 499 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 GUK1Q16774 197 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 RNF212Q495C1 297 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 UBE2DNLQ8IWF7 75 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 OR5C1Q8NGR4 320 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 OR10J6PQ8NGY7 276 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 TMEM263Q8WUH6 116 aaKnown RBP11.26□□□□□ -0.61
HOXC4-203ENST00000507650 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 PPP1R14DQ9NXH3 145 aa11.26□□□□□ -0.61
HOXC4-203ENST00000507650 RYR1P21817 5038 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 H7BYZ3 331 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 HBG1P69891 147 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 HBG2P69892 147 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 ATP6V1FQ16864 119 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 LRRC37A5PQ49AS3 106 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 MIR17HGQ75NE6 70 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 ENKURQ8TC29 256 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 C20orf144Q9BQM9 153 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 NMES1Q9C002 83 aa11.25□□□□□ -0.61
HOXC4-203ENST00000507650 TIMM8BQ9Y5J9 83 aaPredicted RBP11.25□□□□□ -0.61
HOXC4-203ENST00000507650 MUC4Q99102 2169 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 CBY3A6NI87 242 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 F5H768 121 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 Q6ZQT7 251 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 C15orf53Q8NAA6 179 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 RNF141Q8WVD5 230 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 PTTG2Q9NZH5 202 aa11.24□□□□□ -0.61
HOXC4-203ENST00000507650 INMT-MINDY4F8WBC2 141 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 MPDU1O75352 247 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 ATP5G1P05496 136 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
HOXC4-203ENST00000507650 HOXA5P20719 270 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 ATP5G3P48201 142 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 CD300CQ08708 224 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 CLINT1Q14677 625 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 PRR9Q5T870 116 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
HOXC4-203ENST00000507650 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 MARVELD1Q9BSK0 173 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 AGPAT4-IT1Q9H0P7 198 aa11.23□□□□□ -0.61
HOXC4-203ENST00000507650 KLLNB2CW77 178 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 E5RGE8 158 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 ZNF324O75467 553 aaPredicted RBP11.22□□□□□ -0.61
HOXC4-203ENST00000507650 BTN1A1Q13410 526 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 BLNKQ8WV28 456 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 FXYD5Q96DB9 178 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 WDR61Q9GZS3 305 aaKnown RBP11.22□□□□□ -0.61
HOXC4-203ENST00000507650 LINC00588Q9Y4M8 146 aa11.22□□□□□ -0.61
HOXC4-203ENST00000507650 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.61
HOXC4-203ENST00000507650 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms