RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 HLA-DRB4X5D2U9 266 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 TRAV1-1A0A0B4J248 108 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 PGPA6NDG6 321 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 EIF3GO75821 320 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP53-203ENST00000507597 FGF8P55075 233 aaPredicted RBP14.87□□□□□ -0.03
USP53-203ENST00000507597 IGFL4Q6B9Z1 124 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 MORN3Q6PF18 240 aaPredicted RBP14.87□□□□□ -0.03
USP53-203ENST00000507597 SSX7Q7RTT5 188 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 C20orf173Q96LM9 149 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 WFDC10AQ9H1F0 79 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 PPP1R14DQ9NXH3 145 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 PLA2G2EQ9NZK7 142 aa14.87□□□□□ -0.03
USP53-203ENST00000507597 NOTCH1P46531 2555 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 KIR2DL5BA0A0G2JN68 375 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 KIR2DL5BA0A0G2JPC4 375 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 A0A0J9YX75 114 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 KNCNA6PVL3 124 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 UBE2CO00762 179 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 KIR2DL5AQ8N109 375 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 EXOC3-AS1Q8N2X6 119 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 KIR2DL5BQ8NHK3 375 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 CLUHP3Q96NS8 147 aa14.86□□□□□ -0.03
USP53-203ENST00000507597 SERTM2A0A1B0GWG4 89 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 H3BMM0 161 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 K7EQM0 130 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 IFNA1P01562 189 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 FRMD6-AS1P0C7T7 363 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 TEX261Q6UWH6 196 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 OR4B1Q8NGF8 309 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 OR8A1Q8NGG7 326 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 C1QTNF4Q9BXJ3 329 aa14.85□□□□□ -0.03
USP53-203ENST00000507597 HLA-DMBP28068 263 aa14.84□□□□□ -0.03
USP53-203ENST00000507597 TAGLN2P37802 199 aaKnown RBP14.84□□□□□ -0.03
USP53-203ENST00000507597 CITED4Q96RK1 184 aa14.84□□□□□ -0.03
USP53-203ENST00000507597 CSTL1Q9H114 145 aa14.84□□□□□ -0.03
USP53-203ENST00000507597 MANBALQ9NQG1 85 aa14.84□□□□□ -0.03
USP53-203ENST00000507597 F6UZH7 168 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 AMBPP02760 352 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 SLC25A5P05141 298 aaKnown RBP14.83□□□□□ -0.04
USP53-203ENST00000507597 RPL35AP18077 110 aaKnown RBP14.83□□□□□ -0.04
USP53-203ENST00000507597 SUMO1P63165 101 aaKnown RBP14.83□□□□□ -0.04
USP53-203ENST00000507597 HIST1H1AQ02539 215 aaPredicted RBP14.83□□□□□ -0.04
USP53-203ENST00000507597 ZNF124Q15973 351 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 TRPT1Q86TN4 253 aaKnown RBP14.83□□□□□ -0.04
USP53-203ENST00000507597 C5orf17Q8NAS9 161 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 LINC00477Q96M19 166 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 TCEAL7Q9BRU2 100 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 TMPRSS5Q9H3S3 457 aa14.83□□□□□ -0.04
USP53-203ENST00000507597 RBAKDNA6NC62 111 aa14.82□□□□□ -0.04
USP53-203ENST00000507597 RBMY1BA6NDE4 496 aaKnown RBP14.82□□□□□ -0.04
USP53-203ENST00000507597 RBMY1EA6NEQ0 496 aaKnown RBP14.82□□□□□ -0.04
USP53-203ENST00000507597 ZNF705FA8MVS1 300 aaPredicted RBP14.82□□□□□ -0.04
USP53-203ENST00000507597 RBMY1DP0C7P1 496 aaKnown RBP14.82□□□□□ -0.04
USP53-203ENST00000507597 LINC00322Q6ZN03 302 aaPredicted RBP14.82□□□□□ -0.04
USP53-203ENST00000507597 ZNF680Q8NEM1 530 aa14.82□□□□□ -0.04
USP53-203ENST00000507597 TXNDC17Q9BRA2 123 aa14.82□□□□□ -0.04
USP53-203ENST00000507597 M0R3E3 92 aa14.81□□□□□ -0.04
USP53-203ENST00000507597 TSPOP30536 169 aa14.81□□□□□ -0.04
USP53-203ENST00000507597 CNN1P51911 297 aaKnown RBP14.81□□□□□ -0.04
USP53-203ENST00000507597 TMEM78Q5T7P6 136 aa14.81□□□□□ -0.04
USP53-203ENST00000507597 CST9LP1Q5W188 147 aa14.81□□□□□ -0.04
USP53-203ENST00000507597 B9D2Q9BPU9 175 aa14.81□□□□□ -0.04
USP53-203ENST00000507597 A0A1B0GV50 99 aa14.8□□□□□ -0.04
USP53-203ENST00000507597 FBLL1A6NHQ2 334 aaKnown RBP14.8□□□□□ -0.04
USP53-203ENST00000507597 FAM74A7A6NL05 159 aa14.8□□□□□ -0.04
USP53-203ENST00000507597 F6UB75 175 aa14.8□□□□□ -0.04
USP53-203ENST00000507597 UBE2G2P60604 165 aa14.8□□□□□ -0.04
USP53-203ENST00000507597 PMS2P11Q13670 270 aa14.8□□□□□ -0.04
USP53-203ENST00000507597 ZMAT4Q9H898 229 aa14.8□□□□□ -0.04
USP53-203ENST00000507597 DIRC3C9JPN6 131 aa14.79□□□□□ -0.04
USP53-203ENST00000507597 IGKV3-20P01619 116 aa14.79□□□□□ -0.04
USP53-203ENST00000507597 NHLRC4P0CG21 123 aaPredicted RBP14.79□□□□□ -0.04
USP53-203ENST00000507597 RAB14P61106 215 aa14.79□□□□□ -0.04
USP53-203ENST00000507597 GDF5OSQ5U4N7 250 aa14.79□□□□□ -0.04
USP53-203ENST00000507597 HIST1H2BAQ96A08 127 aa14.79□□□□□ -0.04
USP53-203ENST00000507597 GNG13Q9P2W3 67 aa14.79□□□□□ -0.04
USP53-203ENST00000507597 PAGE4O60829 102 aa14.78□□□□□ -0.04
USP53-203ENST00000507597 CA1P00915 261 aaPredicted RBP14.78□□□□□ -0.04
USP53-203ENST00000507597 HAGHQ16775 308 aa14.78□□□□□ -0.04
USP53-203ENST00000507597 C9orf47Q6ZRZ4 202 aa14.78□□□□□ -0.04
USP53-203ENST00000507597 ODF3Q96PU9 254 aa14.78□□□□□ -0.04
USP53-203ENST00000507597 EPDR1Q9UM22 224 aa14.78□□□□□ -0.04
USP53-203ENST00000507597 RPH3ALQ9UNE2 315 aa14.78□□□□□ -0.04
USP53-203ENST00000507597 A8MTW9 85 aa14.77□□□□□ -0.05
USP53-203ENST00000507597 NPIPB6E9PJ23 425 aa14.77□□□□□ -0.05
USP53-203ENST00000507597 Q6ZWC4 215 aa14.77□□□□□ -0.05
USP53-203ENST00000507597 ATG101Q9BSB4 218 aa14.77□□□□□ -0.05
USP53-203ENST00000507597 LENEPQ9Y5L5 61 aa14.77□□□□□ -0.05
USP53-203ENST00000507597 PRAC2D3DTV9 90 aa14.76□□□□□ -0.05
USP53-203ENST00000507597 ZNF705DP0CH99 300 aaPredicted RBP14.76□□□□□ -0.05
USP53-203ENST00000507597 ZNF705BP0CI00 300 aaPredicted RBP14.76□□□□□ -0.05
USP53-203ENST00000507597 LEPP41159 167 aa14.76□□□□□ -0.05
USP53-203ENST00000507597 DEFB1P60022 68 aa14.76□□□□□ -0.05
USP53-203ENST00000507597 ZNF767PQ75MW2 155 aa14.76□□□□□ -0.05
USP53-203ENST00000507597 CYB561D1Q8N8Q1 229 aa14.76□□□□□ -0.05
USP53-203ENST00000507597 SPATA25Q9BR10 227 aa14.76□□□□□ -0.05
USP53-203ENST00000507597 YTHDF2Q9Y5A9 579 aaKnown RBP14.76□□□□□ -0.05
USP53-203ENST00000507597 TRBV7-9A0A0J9YWB2 115 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 GGTLC3B5MD39 225 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 TCRAP04437 139 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms