RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TET1Q8NFU7 2136 aa0.53□□□□□ -2.32
LSM6-205ENST00000507449 TECPR2O15040 1411 aa0.53□□□□□ -2.32
LSM6-205ENST00000507449 SIP14410 1827 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 SNRNP200O75643 2136 aaKnown RBP0.52□□□□□ -2.33
LSM6-205ENST00000507449 TRDV1A0A1B0GX56 115 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 PPP5D1E7EU14 171 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 LYRM1O43325 122 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 TMEM78Q5T7P6 136 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 TRIQKQ629K1 86 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 DCUN1D2Q6PH85 259 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 ZCCHC23Q6ZST2 131 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 OR10AC1Q8NH08 325 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 CCL4L1Q8NHW4 92 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 DYDC1Q8WWB3 177 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 LIMD2Q9BT23 127 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 NAT8BQ9UHF3 227 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 NUBP2Q9Y5Y2 271 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 FREM3P0C091 2139 aa0.52□□□□□ -2.33
LSM6-205ENST00000507449 TRAV23DV6A0A075B6W5 121 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 MAP1LC3B2A6NCE7 125 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 H3BQV1 296 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 SYNMO15061 1565 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 IGHV3-33P01772 117 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 ROCK1Q13464 1354 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 CIRBPQ14011 172 aaKnown RBP0.51□□□□□ -2.33
LSM6-205ENST00000507449 SPATA45Q537H7 98 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 ANGPTL5Q86XS5 388 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 DIRC1Q969H9 104 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 ERBINQ96RT1 1412 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 PCBD2Q9H0N5 130 aa0.51□□□□□ -2.33
LSM6-205ENST00000507449 BCL9O00512 1426 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 YTHDC2Q9H6S0 1430 aaKnown RBP0.5□□□□□ -2.33
LSM6-205ENST00000507449 A0A1W2PRE2 83 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 GABARAPH6UMI1 98 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 K7EIL1 84 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 KPNA4O00629 521 aaPredicted RBP0.5□□□□□ -2.33
LSM6-205ENST00000507449 MT-ND6P03923 174 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 FXYD4P59646 89 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 DIAPH2-AS1Q14236 149 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 CST11Q9H112 138 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 NIT2Q9NQR4 276 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 LAMTOR3Q9UHA4 124 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 MYO18AQ92614 2054 aaKnown RBP0.5□□□□□ -2.33
LSM6-205ENST00000507449 CITO14578 2027 aa0.5□□□□□ -2.33
LSM6-205ENST00000507449 MED12Q93074 2177 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 TRAPPC8Q9Y2L5 1435 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 PTPRFP10586 1907 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 MYH2Q9UKX2 1941 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 FABP2P12104 132 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 S100A5P33763 92 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 VMA21Q3ZAQ7 101 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 STX12Q86Y82 276 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 OR4C12Q96R67 309 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 TCEAL2Q9H3H9 227 aaPredicted RBP0.49□□□□□ -2.33
LSM6-205ENST00000507449 HSPB8Q9UJY1 196 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 TPRKBQ9Y3C4 175 aa0.49□□□□□ -2.33
LSM6-205ENST00000507449 MYLKQ15746 1914 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 KIAA1107Q9UPP5 1409 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 A0A096LPI6 279 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 A0A0D9SG42 100 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 A0A0J9YY99 117 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 FABP4P15090 132 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 S100A11P31949 105 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 MRPS36P82909 103 aaKnown RBP0.48□□□□□ -2.33
LSM6-205ENST00000507449 OCIAD2Q56VL3 154 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 HRCT1Q6UXD1 115 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 ISOC1Q96CN7 298 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 C10orf95Q9H7T3 257 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 SMPXQ9UHP9 88 aa0.48□□□□□ -2.33
LSM6-205ENST00000507449 ASH1LQ9NR48 2969 aaKnown RBP0.48□□□□□ -2.33
LSM6-205ENST00000507449 PIK3C2AO00443 1686 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 ADGBQ8N7X0 1667 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 FABP1P07148 127 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 BCL2P10415 239 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 CROCCP2Q86T23 111 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 RMND5BQ96G75 393 aaPredicted RBP0.47□□□□□ -2.33
LSM6-205ENST00000507449 MCEEQ96PE7 176 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 EFCAB11Q9BUY7 163 aa0.47□□□□□ -2.33
LSM6-205ENST00000507449 MYH3P11055 1940 aa0.46□□□□□ -2.34
LSM6-205ENST00000507449 PDE6GP18545 87 aa0.46□□□□□ -2.34
LSM6-205ENST00000507449 FOXA3P55318 350 aaPredicted RBP0.46□□□□□ -2.34
LSM6-205ENST00000507449 OR5H6Q8NGV6 325 aa0.46□□□□□ -2.34
LSM6-205ENST00000507449 FRAS1Q86XX4 4008 aa0.46□□□□□ -2.34
LSM6-205ENST00000507449 ASCC3Q8N3C0 2202 aaKnown RBP0.46□□□□□ -2.34
LSM6-205ENST00000507449 CHD3Q12873 2000 aaKnown RBP0.45□□□□□ -2.34
LSM6-205ENST00000507449 TRBV30A0A0K0K1B3 111 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 NUPR2A6NF83 97 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 ZNF727A8MUV8 499 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 RPL7P18124 248 aaKnown RBP0.45□□□□□ -2.34
LSM6-205ENST00000507449 SDC2P34741 201 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 SPINK9Q5DT21 86 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 LINC00299Q6ZSB3 139 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 TEX29Q8N6K0 151 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 OR4B1Q8NGF8 309 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 THEM6Q8WUY1 208 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 CLEC2BQ92478 149 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 PRELID3AQ96N28 172 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 CCDC32Q9BV29 185 aa0.45□□□□□ -2.34
LSM6-205ENST00000507449 FKBP11Q9NYL4 201 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms