RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLC25A5P05141 298 aaKnown RBP10.54□□□□□ -0.72
RNF4-208ENST00000507247 BCL2P10415 239 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 CD81P60033 236 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 GNG5P63218 68 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 CCDC28AQ8IWP9 274 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 ZNF738Q8NE65 137 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 MRPL53Q96EL3 112 aaKnown RBP10.54□□□□□ -0.72
RNF4-208ENST00000507247 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 RARRES2Q99969 163 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 CLEC5AQ9NY25 188 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 PRELID1Q9Y255 219 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 PKD1L1Q8TDX9 2849 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 AGRNO00468 2067 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 F6UB75 175 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 IFNA1P01562 189 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 TOR2AQ5JU69 321 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 RPUSD4Q96CM3 377 aaKnown RBP10.53□□□□□ -0.72
RNF4-208ENST00000507247 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 RPH3ALQ9UNE2 315 aa10.53□□□□□ -0.72
RNF4-208ENST00000507247 RBFOX3A6NFN3 312 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 OR11H12B2RN74 326 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 C11orf94C9JXX5 98 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
RNF4-208ENST00000507247 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
RNF4-208ENST00000507247 ZNF506Q5JVG8 444 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 KPRPQ5T749 579 aaPredicted RBP10.52□□□□□ -0.73
RNF4-208ENST00000507247 GDF5OSQ5U4N7 250 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 Q8N1Y9 231 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 RXFP4Q8TDU9 374 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 CITED4Q96RK1 184 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.73
RNF4-208ENST00000507247 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
RNF4-208ENST00000507247 IGKV2-40A0A087WW87 121 aaPredicted RBP10.51□□□□□ -0.73
RNF4-208ENST00000507247 KNCNA6PVL3 124 aa10.51□□□□□ -0.73
RNF4-208ENST00000507247 DIRC3C9JPN6 131 aa10.51□□□□□ -0.73
RNF4-208ENST00000507247 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
RNF4-208ENST00000507247 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
RNF4-208ENST00000507247 MEF2BQ02080 365 aaPredicted RBP10.51□□□□□ -0.73
RNF4-208ENST00000507247 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
RNF4-208ENST00000507247 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
RNF4-208ENST00000507247 SCO2A0A1W2PP80 73 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 TCRAP04437 139 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 TAGLN2P37802 199 aaKnown RBP10.5□□□□□ -0.73
RNF4-208ENST00000507247 CSN1S1P47710 185 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
RNF4-208ENST00000507247 FOXI2Q6ZQN5 318 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 OR8A1Q8NGG7 326 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
RNF4-208ENST00000507247 SAV1Q9H4B6 383 aaPredicted RBP10.5□□□□□ -0.73
RNF4-208ENST00000507247 MEGF8Q7Z7M0 2845 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 A0A0J9YX75 114 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 PEX7O00628 323 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 ERCC8Q13216 396 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 GOLT1AQ6ZVE7 132 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 ARL6IP6Q8N6S5 226 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 EIF5A2Q9GZV4 153 aaKnown RBP10.49□□□□□ -0.73
RNF4-208ENST00000507247 ZMAT5Q9UDW3 170 aaKnown RBP10.49□□□□□ -0.73
RNF4-208ENST00000507247 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
RNF4-208ENST00000507247 LINC00862A6NCI5 91 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
RNF4-208ENST00000507247 HLA-DRB4P13762 266 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
RNF4-208ENST00000507247 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 VGLL1Q99990 258 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 TCEAL7Q9BRU2 100 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 MED9Q9NWA0 146 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 HLA-DRB4X5D2U9 266 aa10.48□□□□□ -0.73
RNF4-208ENST00000507247 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 RBAKDNA6NC62 111 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 C9JQL5 133 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 NPIPB6E9PJ23 425 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 H3BMM0 161 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 CNN1P51911 297 aaKnown RBP10.47□□□□□ -0.73
RNF4-208ENST00000507247 CYB561D1Q8N8Q1 229 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 C11orf52Q96A22 123 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 SGK494Q96LW2 274 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 ASCL2Q99929 193 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 AGPAT4-IT1Q9H0P7 198 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
RNF4-208ENST00000507247 AURKAIP1Q9NWT8 199 aaPredicted RBP10.47□□□□□ -0.73
RNF4-208ENST00000507247 TRAV34A0A0B4J273 112 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 RAB19A4D1S5 217 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.73
RNF4-208ENST00000507247 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.73
RNF4-208ENST00000507247 A8MTW9 85 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 F6UZH7 168 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 PDE6DO43924 150 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 IGLV2-11P01706 119 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 SRP19P09132 144 aaKnown RBP10.46□□□□□ -0.73
RNF4-208ENST00000507247 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.73
RNF4-208ENST00000507247 AKR1C3P42330 323 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms