RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PRELID1Q9Y255 219 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 F5H768 121 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 RLN2P04090 185 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 BAXQ07812 192 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 IL15RAQ13261 267 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 PDE6HQ13956 83 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 Q6ZR54 194 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 SAT2Q96F10 170 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
HMGCS1-203ENST00000507004 PLAC8L1A1L4L8 177 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 M0R2N4 97 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 AZU1P20160 251 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 CCL18P55774 89 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 ASAH1Q13510 395 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 PYGO2Q9BRQ0 406 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 SLC25A31Q9H0C2 315 aa10.17□□□□□ -0.78
HMGCS1-203ENST00000507004 UBE2L5PA0A1B0GUS4 154 aa10.16□□□□□ -0.78
HMGCS1-203ENST00000507004 SNURFLB1AK76 121 aa10.16□□□□□ -0.78
HMGCS1-203ENST00000507004 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-203ENST00000507004 HTN1P15515 57 aa10.16□□□□□ -0.78
HMGCS1-203ENST00000507004 RAB32Q13637 225 aa10.16□□□□□ -0.78
HMGCS1-203ENST00000507004 ZNF503Q96F45 646 aa10.16□□□□□ -0.78
HMGCS1-203ENST00000507004 A0A1B0GVY2 172 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 E5RGE8 158 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 NPIPB6E9PJ23 425 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 H3BQ15 152 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 RTL8CO15255 209 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 PRAF2O60831 178 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 FGF7P21781 194 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 ENKURQ8TC29 256 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
HMGCS1-203ENST00000507004 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 IGSF23A1L1A6 192 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 SLC17A3O00476 420 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 NMBP08949 121 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 MED14OSP0DP75 135 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 GFI1BQ5VTD9 330 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 LINC00612Q8N6U2 182 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 ZNF680Q8NEM1 530 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 NMES1Q9C002 83 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 NOP10Q9NPE3 64 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 ZNF586Q9NXT0 402 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 TIMM9Q9Y5J7 89 aa10.14□□□□□ -0.79
HMGCS1-203ENST00000507004 H3BNG1 76 aa10.13□□□□□ -0.79
HMGCS1-203ENST00000507004 NUDT3O95989 172 aa10.13□□□□□ -0.79
HMGCS1-203ENST00000507004 PRM2P04554 102 aa10.13□□□□□ -0.79
HMGCS1-203ENST00000507004 CLINT1Q14677 625 aa10.13□□□□□ -0.79
HMGCS1-203ENST00000507004 NPCDR1Q9BY65 106 aa10.13□□□□□ -0.79
HMGCS1-203ENST00000507004 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 PRAC2D3DTV9 90 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 C17orf112F2Z3M2 114 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 H3BTX0 84 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 SNRPCP09234 159 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 M6PRP20645 277 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 DAZ2Q13117 558 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 LINC00467Q9BRT7 94 aa10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 MRPL32Q9BYC8 188 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-203ENST00000507004 UPK1BO75841 260 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 PET100P0DJ07 73 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 FCN2Q15485 313 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 OR5C1Q8NGR4 320 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 RXFP4Q8TDU9 374 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 GNPNAT1Q96EK6 184 aaPredicted RBP10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
HMGCS1-203ENST00000507004 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 TRBV7-9A0A0J9YWB2 115 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 NBDYA0A0U1RRE5 68 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 C7orf71A4D174 169 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 BTF3P20290 206 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 TTC32Q5I0X7 151 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 ZNRF2Q8NHG8 242 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 HERC2O95714 4834 aa10.1□□□□□ -0.79
HMGCS1-203ENST00000507004 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 KLLNB2CW77 178 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 CRISP2P16562 243 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 OR5I1Q13606 314 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 ANXA2RQ3ZCQ2 193 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 TMEM78Q5T7P6 136 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 OR51M1Q9H341 326 aa10.09□□□□□ -0.79
HMGCS1-203ENST00000507004 GAGE12BA1L429 117 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 INMT-MINDY4F8WBC2 141 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 M0R3E3 92 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 GAGE7O76087 117 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 NDUFB4O95168 129 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 NBEAP1P0C6P0 100 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms