RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 TNFSF18Q9UNG2 199 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 GOLT1BQ9Y3E0 138 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 TIMM9Q9Y5J7 89 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 M0R2Z0 102 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 ZNF253O75346 499 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 OR10J4P0C629 311 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 PDE6HQ13956 83 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 ACOT6Q3I5F7 207 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-209ENST00000506630 KHDC3LQ587J8 217 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
TCOF1-209ENST00000506630 RNF222A6NCQ9 220 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 PRAC2D3DTV9 90 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 G3V3Q6 166 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 SMLR1H3BR10 107 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 BOLA2-SMG1P6H3BVE0 249 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 EIF3GO75821 320 aaKnown RBP eCLIP9.47□□□□□ -0.89
TCOF1-209ENST00000506630 INSP01308 110 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 AMBPP02760 352 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 RBMY1A1P0DJD3 496 aaKnown RBP9.47□□□□□ -0.89
TCOF1-209ENST00000506630 RBMY1CP0DJD4 496 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 TAS2R45P59539 299 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 NANOS2P60321 138 aaKnown RBP9.47□□□□□ -0.89
TCOF1-209ENST00000506630 RAB2AP61019 212 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 RBMY1FQ15415 496 aaKnown RBP9.47□□□□□ -0.89
TCOF1-209ENST00000506630 ZNF705AQ6ZN79 300 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-209ENST00000506630 BAP18Q8IXM2 172 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 TMEM208Q9BTX3 173 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 AAMDCQ9H7C9 122 aa9.47□□□□□ -0.89
TCOF1-209ENST00000506630 TRAV12-2A0A075B6T6 113 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 M0R3E3 92 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 ARPC5O15511 151 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 NDUFB4O95168 129 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 M6PRP20645 277 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 ATP6V0CP27449 155 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 UBE2L3P68036 154 aaKnown RBP9.46□□□□□ -0.9
TCOF1-209ENST00000506630 FAM122CQ6P4D5 195 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 RNF141Q8WVD5 230 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 PRELID1Q9Y255 219 aa9.46□□□□□ -0.9
TCOF1-209ENST00000506630 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 A0A1W2PPV4 95 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 ICAM4Q14773 271 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 RPL7L1Q6DKI1 246 aaKnown RBP9.45□□□□□ -0.9
TCOF1-209ENST00000506630 C1orf158Q8N1D5 194 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 OR10G9Q8NGN4 311 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 OR10G7Q8NGN6 311 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
TCOF1-209ENST00000506630 PHYHIPLQ96FC7 376 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 NEU1Q99519 415 aa9.45□□□□□ -0.9
TCOF1-209ENST00000506630 PSMG3Q9BT73 122 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-209ENST00000506630 KLK5Q9Y337 293 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-209ENST00000506630 SMIM9A6NGZ8 99 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 CRXO43186 299 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-209ENST00000506630 HBE1P02100 147 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 CDKN1BP46527 198 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 CDC34P49427 236 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-209ENST00000506630 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-209ENST00000506630 RPP25LQ8N5L8 163 aaKnown RBP9.44□□□□□ -0.9
TCOF1-209ENST00000506630 OR2G3Q8NGZ4 309 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-209ENST00000506630 ZNF503Q96F45 646 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
TCOF1-209ENST00000506630 HMGB3O15347 200 aaKnown RBP9.43□□□□□ -0.9
TCOF1-209ENST00000506630 EMP1P54849 157 aa9.43□□□□□ -0.9
TCOF1-209ENST00000506630 RRN3P1Q2M238 152 aa9.43□□□□□ -0.9
TCOF1-209ENST00000506630 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
TCOF1-209ENST00000506630 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
TCOF1-209ENST00000506630 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 A6NJY4 79 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 J3KRW8 73 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 MBP02144 154 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 TSPOP30536 169 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
TCOF1-209ENST00000506630 SERF2P84101 59 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 ERCC8Q13216 396 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 GNPNAT1Q96EK6 184 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-209ENST00000506630 Q9H3A6 140 aa9.42□□□□□ -0.9
TCOF1-209ENST00000506630 IGKV2-40A0A087WW87 121 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-209ENST00000506630 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 ZNF705GA8MUZ8 300 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-209ENST00000506630 TAAR5O14804 337 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 IGKV2D-40P01614 121 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-209ENST00000506630 ARL14EPLP0DKL9 152 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 CT45A10P0DMU9 189 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 LEPP41159 167 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 CSN1S1P47710 185 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 LINC01587Q99440 93 aa9.41□□□□□ -0.9
TCOF1-209ENST00000506630 KIR3DS1Q14943 382 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 GFI1BQ5VTD9 330 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms