RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 LYRM2Q9NU23 88 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE2-209ENST00000506419 ZNF586Q9NXT0 402 aa10.12□□□□□ -0.79
CDC42SE2-209ENST00000506419 SIX6O95475 246 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 CT45A10P0DMU9 189 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 S100A10P60903 97 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 IFITM3Q01628 133 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 ASAH1Q13510 395 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 LINC00299Q6ZSB3 139 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 CHAC2Q8WUX2 184 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 SLC39A9Q9NUM3 307 aa10.11□□□□□ -0.79
CDC42SE2-209ENST00000506419 CBY3A6NI87 242 aa10.1□□□□□ -0.79
CDC42SE2-209ENST00000506419 PRSS29PA6NIE9 313 aa10.1□□□□□ -0.79
CDC42SE2-209ENST00000506419 PVALBP20472 110 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-209ENST00000506419 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
CDC42SE2-209ENST00000506419 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
CDC42SE2-209ENST00000506419 PXMP4Q9Y6I8 212 aa10.1□□□□□ -0.79
CDC42SE2-209ENST00000506419 UBE2L5PA0A1B0GUS4 154 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 F5H768 121 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 NHLH2Q02577 135 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 GFI1BQ5VTD9 330 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 MZT2BQ6NZ67 158 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 OR10J6PQ8NGY7 276 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 RNASE8Q8TDE3 154 aaKnown RBP10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 DNAH5Q8TE73 4624 aa10.09□□□□□ -0.79
CDC42SE2-209ENST00000506419 H0YIZ8 118 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 H7BYZ3 331 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 NDUFB4O95168 129 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 FGF7P21781 194 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 BAXQ07812 192 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 GUK1Q16774 197 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 ZNF493Q6ZR52 646 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 C15orf53Q8NAA6 179 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 C16orf74Q96GX8 76 aa10.08□□□□□ -0.8
CDC42SE2-209ENST00000506419 TRBV19A0A075B6N1 114 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 A6NHS1 94 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 NPIPB6E9PJ23 425 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 J3KRW8 73 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 M0R3E3 92 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 ATP5G1P05496 136 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 PYYP10082 97 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 ATP5G3P48201 142 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 HBG1P69891 147 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 HBG2P69892 147 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 ERCC8Q13216 396 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 STX12Q86Y82 276 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 S100ZQ8WXG8 99 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 PFDN5Q99471 154 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 C20orf144Q9BQM9 153 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 GPN1Q9HCN4 374 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 OR5AC2Q9NZP5 309 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 ABCA13Q86UQ4 5058 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 HSPG2P98160 4391 aa10.07□□□□□ -0.8
CDC42SE2-209ENST00000506419 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 ZNF253O75346 499 aa10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 UPK1BO75841 260 aa10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 NUDT3O95989 172 aa10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 LINC00612Q8N6U2 182 aa10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 FAM167A-AS1Q96KT0 104 aa10.06□□□□□ -0.8
CDC42SE2-209ENST00000506419 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 THAP6Q8TBB0 222 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 RNF141Q8WVD5 230 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 FAM19A4Q96LR4 140 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 ODF3Q96PU9 254 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 NPCDR1Q9BY65 106 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
CDC42SE2-209ENST00000506419 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 MPDU1O75352 247 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 ZNF324O75467 553 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 LEPP41159 167 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 MIR17HGQ75NE6 70 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 CCDC28AQ8IWP9 274 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 OR5C1Q8NGR4 320 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 BLNKQ8WV28 456 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 MRPL53Q96EL3 112 aaKnown RBP10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 SLC25A2Q9BXI2 301 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 NMES1Q9C002 83 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
CDC42SE2-209ENST00000506419 NACAE9PAV3 2078 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 E5RGE8 158 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 INMT-MINDY4F8WBC2 141 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 RLN2P04090 185 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 HOXA5P20719 270 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 CD300CQ08708 224 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 OR5I1Q13606 314 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 ENKURQ8TC29 256 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 TIMM9Q9Y5J7 89 aa10.03□□□□□ -0.8
CDC42SE2-209ENST00000506419 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
CDC42SE2-209ENST00000506419 GAGE7O76087 117 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms