RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 IGHV3OR16-12A0A075B7B8 117 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 M0R2Z0 102 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 TSPOP30536 169 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 SERF2P84101 59 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 PMS2P11Q13670 270 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 RNF141Q8WVD5 230 aa12.08□□□□□ -0.48
SNCA-209ENST00000506244 G3V3Q6 166 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 TAAR5O14804 337 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 DEFB4AO15263 64 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 ARPC5O15511 151 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 NDUFB4O95168 129 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 HBE1P02100 147 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 OR10J4P0C629 311 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 ATP6V0CP27449 155 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 RAB2AP61019 212 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 PQLC2Q6ZP29 291 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 OR10G4Q8NGN3 311 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 FXYD5Q96DB9 178 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 ODF3Q96PU9 254 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 RFNGQ9Y644 331 aa12.07□□□□□ -0.48
SNCA-209ENST00000506244 CDKN1BP46527 198 aa12.06□□□□□ -0.48
SNCA-209ENST00000506244 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
SNCA-209ENST00000506244 LYPD1Q8N2G4 141 aa12.06□□□□□ -0.48
SNCA-209ENST00000506244 TMEM256Q8N2U0 113 aa12.06□□□□□ -0.48
SNCA-209ENST00000506244 CSMD3Q7Z407 3707 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 NPIPB6E9PJ23 425 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 JTBO76095 146 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
SNCA-209ENST00000506244 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 ZNF345Q14585 488 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 RBMY1FQ15415 496 aaKnown RBP12.05□□□□□ -0.48
SNCA-209ENST00000506244 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
SNCA-209ENST00000506244 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 PHYHIPLQ96FC7 376 aa12.05□□□□□ -0.48
SNCA-209ENST00000506244 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
SNCA-209ENST00000506244 M0R3E3 92 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 LEPP41159 167 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 CSN1S1P47710 185 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 ICAM4Q14773 271 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 EXOC3-AS1Q8N2X6 119 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 C20orf144Q9BQM9 153 aa12.04□□□□□ -0.48
SNCA-209ENST00000506244 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
SNCA-209ENST00000506244 HMSDA8MTL9 139 aa12.03□□□□□ -0.48
SNCA-209ENST00000506244 CRXO43186 299 aaPredicted RBP12.03□□□□□ -0.48
SNCA-209ENST00000506244 NANOS2P60321 138 aaKnown RBP12.03□□□□□ -0.48
SNCA-209ENST00000506244 FAM74A1Q5RGS3 127 aa12.03□□□□□ -0.48
SNCA-209ENST00000506244 CEMP1Q6PRD7 247 aaPredicted RBP12.03□□□□□ -0.48
SNCA-209ENST00000506244 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
SNCA-209ENST00000506244 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
SNCA-209ENST00000506244 TRAV12-2A0A075B6T6 113 aa12.02□□□□□ -0.49
SNCA-209ENST00000506244 LOC102723971A0A1B0GUV8 181 aa12.02□□□□□ -0.49
SNCA-209ENST00000506244 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
SNCA-209ENST00000506244 SMLR1H3BR10 107 aa12.02□□□□□ -0.49
SNCA-209ENST00000506244 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
SNCA-209ENST00000506244 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
SNCA-209ENST00000506244 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
SNCA-209ENST00000506244 ACTR3CQ9C0K3 210 aaPredicted RBP12.02□□□□□ -0.49
SNCA-209ENST00000506244 Q9H3A6 140 aa12.02□□□□□ -0.49
SNCA-209ENST00000506244 STAG3L2P0CL84 134 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 STAG3L3P0CL85 134 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
SNCA-209ENST00000506244 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
SNCA-209ENST00000506244 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 RXFP4Q8TDU9 374 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 RAB24Q969Q5 203 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 OTORQ9NRC9 128 aa12.01□□□□□ -0.49
SNCA-209ENST00000506244 A0A0D9SG52 128 aa12□□□□□ -0.49
SNCA-209ENST00000506244 H7BYZ3 331 aa12□□□□□ -0.49
SNCA-209ENST00000506244 ARL14EPLP0DKL9 152 aa12□□□□□ -0.49
SNCA-209ENST00000506244 CT45A10P0DMU9 189 aa12□□□□□ -0.49
SNCA-209ENST00000506244 TAS2R60P59551 318 aa12□□□□□ -0.49
SNCA-209ENST00000506244 AKR1C8PQ5T2L2 129 aa12□□□□□ -0.49
SNCA-209ENST00000506244 C9orf47Q6ZRZ4 202 aa12□□□□□ -0.49
SNCA-209ENST00000506244 CMTM2Q8TAZ6 248 aa12□□□□□ -0.49
SNCA-209ENST00000506244 LINC01587Q99440 93 aa12□□□□□ -0.49
SNCA-209ENST00000506244 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
SNCA-209ENST00000506244 RBAKDNA6NC62 111 aa11.99□□□□□ -0.49
SNCA-209ENST00000506244 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
SNCA-209ENST00000506244 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
SNCA-209ENST00000506244 EMP1P54849 157 aa11.99□□□□□ -0.49
SNCA-209ENST00000506244 GFI1BQ5VTD9 330 aa11.99□□□□□ -0.49
SNCA-209ENST00000506244 NIPSNAP3BQ9BS92 247 aa11.99□□□□□ -0.49
SNCA-209ENST00000506244 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
SNCA-209ENST00000506244 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
SNCA-209ENST00000506244 TRAV10A0A0B4J240 114 aa11.98□□□□□ -0.49
SNCA-209ENST00000506244 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
SNCA-209ENST00000506244 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
SNCA-209ENST00000506244 CXorf1O96002 111 aa11.98□□□□□ -0.49
SNCA-209ENST00000506244 NMBP08949 121 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms