RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 A0A1W2PRF3 423 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 A0A1W2PRM7 423 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 HRASP01112 189 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 TRGC1P0CF51 173 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 PVALBP20472 110 aaPredicted RBP4.45□□□□□ -1.7
SCLT1-207ENST00000506233 SAA4P35542 130 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 RPL13AP40429 203 aaKnown RBP4.45□□□□□ -1.7
SCLT1-207ENST00000506233 LGALS7P47929 136 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 SELENOTP62341 195 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 GATD1Q8NB37 220 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 ZNF502Q8TBZ5 544 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 SLC35E1Q96K37 410 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 ISLRO14498 428 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 MT-CO2P00403 227 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 ESDP10768 282 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 PSMB3P49720 205 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 GNG5P63218 68 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 FLI1Q01543 452 aaPredicted RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 MANBALQ9NQG1 85 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 SMCO4Q9NRQ5 59 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 URGCP-MRPS24S4R325 110 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 SPTBN1Q01082 2364 aaKnown RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 HELZ2Q9BYK8 2649 aaKnown RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 IFNA17P01571 189 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 ZNF80P51504 273 aaPredicted RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 EIF5AP63241 154 aaKnown RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 RNASE7Q9H1E1 156 aaKnown RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 TMEM14CQ9P0S9 112 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 LY96Q9Y6Y9 160 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 A6NDX4 124 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 CXorf1O96002 111 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 HLA-DRB1P01911 266 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 SNRPCP09234 159 aaKnown RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 AKR1C8PQ5T2L2 129 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 EIF5AL1Q6IS14 154 aaKnown RBP4.44□□□□□ -1.7
SCLT1-207ENST00000506233 ZNF355PQ9NSJ1 428 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 HILPDAQ9Y5L2 63 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 VPS13DQ5THJ4 4388 aa4.44□□□□□ -1.7
SCLT1-207ENST00000506233 TRBV6-1A0A0K0K1D8 114 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 COX7A1P24310 79 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 NAT8Q9UHE5 227 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 S4R3C0 116 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 B4DEV8 164 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 G3V318 75 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 RPL24P83731 157 aaKnown RBP4.43□□□□□ -1.7
SCLT1-207ENST00000506233 PSG3Q16557 428 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 TMEM136Q6ZRR5 245 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 DLX4Q92988 240 aaPredicted RBP4.43□□□□□ -1.7
SCLT1-207ENST00000506233 SFRP2Q96HF1 295 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 C20orf173Q96LM9 149 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 IMMP2LQ96T52 175 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 RP1L1Q8IWN7 2480 aaPredicted RBP4.43□□□□□ -1.7
SCLT1-207ENST00000506233 IFNA10P01566 189 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 CRYBB3P26998 211 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 HLA-DMBP28068 263 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 RTL8BQ17RB0 113 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 OR10X1Q8NGY0 326 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 SGMS2Q8NHU3 365 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 RCHY1Q96PM5 261 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 SLC25A39Q9BZJ4 359 aaPredicted RBP4.43□□□□□ -1.7
SCLT1-207ENST00000506233 PLEKHA3Q9HB20 300 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 DPM3Q9P2X0 92 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 MUC4Q99102 2169 aa4.43□□□□□ -1.7
SCLT1-207ENST00000506233 A0A096LNJ9 63 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 A0A1W2PRE2 83 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 ATP6V0E1O15342 81 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 GAS8-AS1O95177 125 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 TCTEX1D4Q5JR98 221 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 PRR9Q5T870 116 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 LCNL1Q6ZST4 164 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 Q6ZVQ6 151 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 LINC00305Q7Z4B0 112 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 OR8B3Q8NGG8 313 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 OR8B2Q96RD0 313 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 HIST1H2BLQ99880 126 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 ACTR3CQ9C0K3 210 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-207ENST00000506233 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 TRBV19A0A075B6N1 114 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 INAFM1C9JVW0 142 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 PRAC2D3DTV9 90 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 FOXA3P55318 350 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-207ENST00000506233 TDRG1Q3Y452 100 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 TMEM256Q8N2U0 113 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 C2orf48Q96LS8 159 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 SHANK2-AS3Q9BTD1 123 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 MLXQ9UH92 298 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 ACACBO00763 2458 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 ZNF98A6NK75 572 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 TOMM40O96008 361 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 IFNA5P01569 189 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 ACOT6Q3I5F7 207 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-207ENST00000506233 FAM78BQ5VT40 261 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 IGFL4Q6B9Z1 124 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 UNQ9165/PRO28630Q6UXU0 137 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 EXOC3-AS1Q8N2X6 119 aa4.42□□□□□ -1.7
SCLT1-207ENST00000506233 RBM7Q9Y580 266 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms