RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 BCL9O00512 1426 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 MAST4O15021 2626 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 PIAS1O75925 651 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 IGHV3-33P01772 117 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 PRH1P02810 166 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 IDO1P14902 403 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 INSL3P51460 131 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 TCTAP57738 103 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 HBBP68871 147 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 EIF3IQ13347 325 aaKnown RBP0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 RTL8BQ17RB0 113 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 VMA21Q3ZAQ7 101 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 OCIAD2Q56VL3 154 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 C6orf52Q5T4I8 152 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 FKBP1CQ5VVH2 108 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 C1orf140Q5VVS0 124 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 C5orf17Q8NAS9 161 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 GRPEL2Q8TAA5 225 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 TSKUQ8WUA8 353 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 AP1S3Q96PC3 154 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 SMR3AQ99954 134 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 GINS3Q9BRX5 216 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 EFCAB11Q9BUY7 163 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 TPRKBQ9Y3C4 175 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 DOCK4Q8N1I0 1966 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 RTL9Q8NET4 1388 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZDBF2Q9HCK1 2354 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 PTPRDP23468 1912 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 CACNA1EQ15878 2313 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 FREM3P0C091 2139 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 NAV3Q8IVL0 2385 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 YTHDC2Q9H6S0 1430 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 KIAA1107Q9UPP5 1409 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 A0A0J9YY99 117 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 ODAMA1E959 279 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 H3BQV1 296 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 KPNA4O00629 521 aaPredicted RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 PFDN1O60925 122 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 MT-ND6P03923 174 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 FXYD4P59646 89 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 RPL37AP61513 92 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 BASP1P80723 227 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 MRPS36P82909 103 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 QRFPP83859 136 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 MIR22HGQ0VDD5 57 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 DIAPH2-AS1Q14236 149 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 MSMO1Q15800 293 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 CASC2Q6XLA1 102 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 FOXI2Q6ZQN5 318 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 PHF5AQ7RTV0 110 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 Q86TA4 180 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 C10orf111Q8N326 155 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 OR4B1Q8NGF8 309 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 PLEKHB2Q96CS7 222 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 OR4C12Q96R67 309 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 CCL19Q99731 98 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 SS18L2Q9UHA2 77 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 EIF3AQ14152 1382 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 KMT2DO14686 5537 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 MYO5AQ9Y4I1 1855 aaKnown RBP0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 SPTBP11277 2137 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 COL24A1Q17RW2 1714 aa0.16□□□□□ -2.38
HMGB1P29-201ENST00000505659 FRMPD1Q5SYB0 1578 aa0.15□□□□□ -2.38
HMGB1P29-201ENST00000505659 MUC4Q99102 2169 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 PRORSD1PA6NEY8 169 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 C5orf58C9J3I9 102 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 SULT1C4O75897 302 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 FABP4P15090 132 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 PDE6GP18545 87 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 CAV3P56539 151 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 NDUFA6P56556 154 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 GNG3P63215 75 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 STX19Q8N4C7 294 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 FAM24BQ8N5W8 94 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 TET1Q8NFU7 2136 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 OR5AK2Q8NH90 309 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 AP3S1Q92572 193 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 ISOC1Q96CN7 298 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 RMND5BQ96G75 393 aaPredicted RBP0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 BIN3Q9NQY0 253 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 MGAMO43451 1857 aa0.15□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRAPPC8Q9Y2L5 1435 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 A6NN06 94 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 BBIP1A8MTZ0 92 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 MFSD11O43934 449 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 IGHV3-30P01768 117 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRACP01848 142 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 CSN2P05814 226 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 IGHV3-30-5P0DP03 117 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 TPT1P13693 172 aaKnown RBP0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 NEDD8Q15843 81 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 SPINK13Q1W4C9 94 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 C10orf99Q6UWK7 81 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 PRR15Q8IV56 129 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 DYDC1Q8WWB3 177 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 PLAC4Q8WY50 150 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 BORCS8Q96FH0 119 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 LIMD2Q9BT23 127 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 FAM103A1Q9BTL3 118 aaKnown RBP0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms