RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 LRTM2Q8N967 370 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 ZNF738Q8NE65 137 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 BPIFCQ8NFQ6 507 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 OR8A1Q8NGG7 326 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 TMEM263Q8WUH6 116 aaKnown RBP4.05□□□□□ -1.76
GYPB-204ENST00000504951 TRIM63Q969Q1 353 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 TMEM147Q9BVK8 224 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 SLIRPQ9GZT3 109 aaKnown RBP4.05□□□□□ -1.76
GYPB-204ENST00000504951 NOP10Q9NPE3 64 aaKnown RBP4.05□□□□□ -1.76
GYPB-204ENST00000504951 FAM30AQ9NZY2 134 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 SCP2D1Q9UJQ7 156 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 SLC45A2Q9UMX9 530 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 A0A096LPF7 62 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 A0A0J9YY99 117 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 DUXBA0A1W2PPF3 345 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 H3BTX0 84 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 CFDP00746 253 aaPredicted RBP4.04□□□□□ -1.76
GYPB-204ENST00000504951 IL5P05113 134 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 SLC25A6P12236 298 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 ANXA3P12429 323 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 POLR2GP62487 172 aaKnown RBP eCLIP4.04□□□□□ -1.76
GYPB-204ENST00000504951 RHOBP62745 196 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 SRPXP78539 464 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 DAZ2Q13117 558 aaKnown RBP4.04□□□□□ -1.76
GYPB-204ENST00000504951 ASAH1Q13510 395 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 OR5I1Q13606 314 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 PSG3Q16557 428 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 TMEM128Q5BJH2 165 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 MORN5Q5VZ52 161 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 CYP2G1PQ6ZSU1 146 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 ZBTB8BQ8NAP8 495 aaPredicted RBP4.04□□□□□ -1.76
GYPB-204ENST00000504951 VSIG2Q96IQ7 327 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 SCGB3A2Q96PL1 93 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 CCDC59Q9P031 241 aaKnown RBP4.04□□□□□ -1.76
GYPB-204ENST00000504951 RABL2BQ9UNT1 228 aa4.04□□□□□ -1.76
GYPB-204ENST00000504951 TNXBP22105 4242 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 A0A087X0K7 114 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 LINC00854A0A1B0GVQ3 168 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 GAGE12BA1L429 117 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 SMCO3A2RU48 225 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 FABP12A6NFH5 140 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 H7BYZ3 331 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 SLC17A3O00476 420 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 HYPMO75409 117 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 MED6O75586 246 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 GAGE7O76087 117 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 SFT2D2O95562 160 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 OR5G3P0C626 314 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 LINC00869P0C866 280 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 DNAH10OSP0CZ25 163 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 RPL7P18124 248 aaKnown RBP4.03□□□□□ -1.76
GYPB-204ENST00000504951 PLP1P60201 277 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 RRAS2P62070 204 aaPredicted RBP4.03□□□□□ -1.76
GYPB-204ENST00000504951 SLC38A11Q08AI6 406 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 SLAQ13239 276 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 GFI1BQ5VTD9 330 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 C10orf126Q8N4M7 172 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 RPUSD4Q96CM3 377 aaKnown RBP4.03□□□□□ -1.76
GYPB-204ENST00000504951 GPR82Q96P67 336 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 CIB3Q96Q77 187 aaPredicted RBP4.03□□□□□ -1.76
GYPB-204ENST00000504951 ARL6Q9H0F7 186 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 MSRB1Q9NZV6 116 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 RSL24D1Q9UHA3 163 aaKnown RBP4.03□□□□□ -1.76
GYPB-204ENST00000504951 HIGD1AQ9Y241 93 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 STRAPQ9Y3F4 350 aaKnown RBP4.03□□□□□ -1.76
GYPB-204ENST00000504951 V9GYH0 126 aa4.03□□□□□ -1.76
GYPB-204ENST00000504951 H3BMQ9 156 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 H3BQ15 152 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 J3KRW8 73 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 SSSCA1O60232 199 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 NXPH4O95158 308 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 METTL15P1P0C7V9 234 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 S100A7P31151 101 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 CDKN1BP46527 198 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 RAP2BP61225 183 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 Q6ZTI0 123 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 MCFD2Q8NI22 146 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 RAB2BQ8WUD1 216 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 TMEM37Q8WXS4 190 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 LINC00467Q9BRT7 94 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 MRPS26Q9BYN8 205 aaKnown RBP4.02□□□□□ -1.77
GYPB-204ENST00000504951 ARV1Q9H2C2 271 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 ZNF331Q9NQX6 463 aaPredicted RBP4.02□□□□□ -1.77
GYPB-204ENST00000504951 PPP1R14DQ9NXH3 145 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 PSENENQ9NZ42 101 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 RABL2AQ9UBK7 228 aaPredicted RBP4.02□□□□□ -1.77
GYPB-204ENST00000504951 TNFRSF18Q9Y5U5 241 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 LY96Q9Y6Y9 160 aa4.02□□□□□ -1.77
GYPB-204ENST00000504951 TRAV5A0A0B4J249 113 aa4.01□□□□□ -1.77
GYPB-204ENST00000504951 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
GYPB-204ENST00000504951 C9orf170A2RU37 121 aa4.01□□□□□ -1.77
GYPB-204ENST00000504951 K7EPK0 472 aa4.01□□□□□ -1.77
GYPB-204ENST00000504951 ZNF324O75467 553 aaPredicted RBP4.01□□□□□ -1.77
GYPB-204ENST00000504951 SLPIP03973 132 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms