RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 ZNF331Q9NQX6 463 aaPredicted RBP4.3□□□□□ -1.72
SPOP-208ENST00000504889 RPH3ALQ9UNE2 315 aa4.3□□□□□ -1.72
SPOP-208ENST00000504889 CSMD3Q7Z407 3707 aa4.3□□□□□ -1.72
SPOP-208ENST00000504889 TRBV19A0A075B6N1 114 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 FXYD6-FXYD2A0A087WZ82 144 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 H3BQ15 152 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 IGLC2P0DOY2 106 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 HIST1H1EP10412 219 aaKnown RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 LEPP41159 167 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 CDKN1BP46527 198 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 CSN1S1P47710 185 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 DAD1P61803 113 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 UBE2L3P68036 154 aaKnown RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 ZNF266Q14584 549 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 ICAM4Q14773 271 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 ACOT6Q3I5F7 207 aaPredicted RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 KHDC3LQ587J8 217 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 TMEM78Q5T7P6 136 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 FAM222AQ5U5X8 452 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 ZNF705AQ6ZN79 300 aaPredicted RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 IQCF2Q8IXL9 164 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 EXOC3-AS1Q8N2X6 119 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 CLUHP3Q96NS8 147 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 NIPSNAP3BQ9BS92 247 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 RNF126Q9BV68 326 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 CELA1Q9UNI1 258 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 FUT9Q9Y231 359 aa4.29□□□□□ -1.72
SPOP-208ENST00000504889 YTHDF2Q9Y5A9 579 aaKnown RBP4.29□□□□□ -1.72
SPOP-208ENST00000504889 PRAC2D3DTV9 90 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 M0R3E3 92 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
SPOP-208ENST00000504889 GIPP09681 153 aaPredicted RBP4.28□□□□□ -1.72
SPOP-208ENST00000504889 NBEAP1P0C6P0 100 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 DEFB130BP0DP73 79 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 DEFB130AP0DP74 79 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 RANP62826 216 aaKnown RBP4.28□□□□□ -1.72
SPOP-208ENST00000504889 PDE6HQ13956 83 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 FAM74A1Q5RGS3 127 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 C1orf158Q8N1D5 194 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 TMEM256Q8N2U0 113 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 HSD17B11Q8NBQ5 300 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 OR10G4Q8NGN3 311 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 OR10G9Q8NGN4 311 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 OR10G7Q8NGN6 311 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 CMTM2Q8TAZ6 248 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 CHAC2Q8WUX2 184 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 RNF141Q8WVD5 230 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 LINC00476Q8WZB0 136 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 HYLS1Q96M11 299 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 NEU1Q99519 415 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 PARD6GQ9BYG4 376 aaPredicted RBP4.28□□□□□ -1.72
SPOP-208ENST00000504889 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 TMEM14CQ9P0S9 112 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 PRELID1Q9Y255 219 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
SPOP-208ENST00000504889 RYR3Q15413 4870 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 IGHV4-4A0A075B6R2 117 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
SPOP-208ENST00000504889 BORCS7-ASMTA0A0B4J1R7 106 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 TRAV12-3A0A0B4J271 114 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 SNURFLB1AK76 121 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 H7BYZ3 331 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 HMGB3O15347 200 aaKnown RBP4.27□□□□□ -1.73
SPOP-208ENST00000504889 ZNF253O75346 499 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 EIF3GO75821 320 aaKnown RBP eCLIP4.27□□□□□ -1.73
SPOP-208ENST00000504889 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
SPOP-208ENST00000504889 GPX1P07203 203 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 M6PRP20645 277 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 TCTAP57738 103 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 ERCC8Q13216 396 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 XP32Q5T750 250 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 AMTNQ6UX39 209 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 UBE2DNLQ8IWF7 75 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 OR2T35Q8NGX2 323 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 ASB13Q8WXK3 278 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 MRPL53Q96EL3 112 aaKnown RBP4.27□□□□□ -1.73
SPOP-208ENST00000504889 SAT2Q96F10 170 aaPredicted RBP4.27□□□□□ -1.73
SPOP-208ENST00000504889 C16orf74Q96GX8 76 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 NDUFAF3Q9BU61 184 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 PLA2G2EQ9NZK7 142 aa4.27□□□□□ -1.73
SPOP-208ENST00000504889 TENM2Q9NT68 2774 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 LYSTQ99698 3801 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 CBY3A6NI87 242 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 LYRM9A8MSI8 78 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 NPIPB6E9PJ23 425 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 ARPC5O15511 151 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 CRXO43186 299 aaPredicted RBP4.26□□□□□ -1.73
SPOP-208ENST00000504889 MBP02144 154 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 PRM2P04554 102 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 RNASE4P34096 147 aaKnown RBP4.26□□□□□ -1.73
SPOP-208ENST00000504889 CDC34P49427 236 aaPredicted RBP4.26□□□□□ -1.73
SPOP-208ENST00000504889 TAS2R60P59551 318 aa4.26□□□□□ -1.73
SPOP-208ENST00000504889 RAB2AP61019 212 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms