RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 LYRM2Q9NU23 88 aaPredicted RBP9.2□□□□□ -0.94
DDX41-204ENST00000504807 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 NDUFB4O95168 129 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 HTN1P15515 57 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 CXCL2P19875 107 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 ZNF846Q147U1 533 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 PXDC1Q5TGL8 231 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 LCN15Q6UWW0 184 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 LRRC20Q8TCA0 184 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 CCDC32Q9BV29 185 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 UQCC1Q9NVA1 299 aa9.19□□□□□ -0.94
DDX41-204ENST00000504807 H0YIZ8 118 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 J3KRW8 73 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 M0R3E3 92 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 PYYP10082 97 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 CDKN1BP46527 198 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 SULT1A1P50225 295 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 TAS2R60P59551 318 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 ERCC8Q13216 396 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 ASAH1Q13510 395 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 Q6ZQT7 251 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 BPIFA4PQ86YQ2 179 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 SLC50A1Q9BRV3 221 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 DNAJC4Q9NNZ3 241 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 SLC39A9Q9NUM3 307 aa9.18□□□□□ -0.94
DDX41-204ENST00000504807 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 S100A7P31151 101 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 RPL29P47914 159 aaKnown RBP9.17□□□□□ -0.94
DDX41-204ENST00000504807 NHLH2Q02577 135 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
DDX41-204ENST00000504807 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 NDUFA13Q9P0J0 144 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 PXMP4Q9Y6I8 212 aa9.17□□□□□ -0.94
DDX41-204ENST00000504807 TRBV19A0A075B6N1 114 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 F5H768 121 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 HOXA5P20719 270 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 FGF7P21781 194 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 B2MP61769 119 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 BAXQ07812 192 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 RNF212Q495C1 297 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 THAP6Q8TBB0 222 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 RNF141Q8WVD5 230 aa9.16□□□□□ -0.94
DDX41-204ENST00000504807 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 SOHLH1Q5JUK2 328 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 PRR9Q5T870 116 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 TMEM256Q8N2U0 113 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 ZNRF2Q8NHG8 242 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
DDX41-204ENST00000504807 CHAC2Q8WUX2 184 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 FAM167A-AS1Q96KT0 104 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 FAM19A4Q96LR4 140 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 SLC25A2Q9BXI2 301 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 NPCDR1Q9BY65 106 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 PPP1R14DQ9NXH3 145 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
DDX41-204ENST00000504807 A6NHS1 94 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 CBY3A6NI87 242 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 UPK1BO75841 260 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 NUDT3O95989 172 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 S100A11P31949 105 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 H2BFSP57053 126 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 CD300CQ08708 224 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 MIR17HGQ75NE6 70 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 KRTAP1-5Q9BYS1 174 aa9.14□□□□□ -0.95
DDX41-204ENST00000504807 GPN1Q9HCN4 374 aaPredicted RBP9.14□□□□□ -0.95
DDX41-204ENST00000504807 H7BYZ3 331 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 EIF3GO75821 320 aaKnown RBP eCLIP9.13□□□□□ -0.95
DDX41-204ENST00000504807 ATP5G1P05496 136 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 ATP5G3P48201 142 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 BTN1A1Q13410 526 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 Q6ZRG5 221 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 C15orf53Q8NAA6 179 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 OR10J6PQ8NGY7 276 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 AGPAT4-IT1Q9H0P7 198 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 TMEM14CQ9P0S9 112 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 TIMM8BQ9Y5J9 83 aaPredicted RBP9.13□□□□□ -0.95
DDX41-204ENST00000504807 FAT1Q14517 4588 aa9.13□□□□□ -0.95
DDX41-204ENST00000504807 IGKV2-40A0A087WW87 121 aaPredicted RBP9.12□□□□□ -0.95
DDX41-204ENST00000504807 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 ZNF253O75346 499 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 ZNF324O75467 553 aaPredicted RBP9.12□□□□□ -0.95
DDX41-204ENST00000504807 GAGE7O76087 117 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 IGKV2D-40P01614 121 aaPredicted RBP9.12□□□□□ -0.95
DDX41-204ENST00000504807 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 PVALBP20472 110 aaPredicted RBP9.12□□□□□ -0.95
DDX41-204ENST00000504807 TNP2Q05952 138 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms