RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PAXXQ9BUH6 204 aa3.63□□□□□ -1.83
LMNB1-208ENST00000504788 UBQLN2Q9UHD9 624 aa3.63□□□□□ -1.83
LMNB1-208ENST00000504788 YTHDF2Q9Y5A9 579 aaKnown RBP3.63□□□□□ -1.83
LMNB1-208ENST00000504788 DNAH7Q8WXX0 4024 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 MAP1LC3B2A6NCE7 125 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 ZNF705FA8MVS1 300 aaPredicted RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 OR11H12B2RN74 326 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 H3BMM0 161 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 CRXO43186 299 aaPredicted RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 IGLV2-11P01706 119 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 HLA-DRB4P13762 266 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 BMI1P35226 326 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 FGF8P55075 233 aaPredicted RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 EIF5AP63241 154 aaKnown RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 DEFA6Q01524 100 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 TNP2Q05952 138 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 KHDC3LQ587J8 217 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 WFDC3Q8IUB2 231 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 LYPD1Q8N2G4 141 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 SLC50A1Q9BRV3 221 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 ACTR3CQ9C0K3 210 aaPredicted RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 MAP1LC3BQ9GZQ8 125 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 SAV1Q9H4B6 383 aaPredicted RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 PFDN2Q9UHV9 154 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 RNF24Q9Y225 148 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 TMA7Q9Y2S6 64 aaKnown RBP3.62□□□□□ -1.83
LMNB1-208ENST00000504788 HLA-DRB4X5D2U9 266 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 STARD9Q9P2P6 4700 aa3.62□□□□□ -1.83
LMNB1-208ENST00000504788 A0A1W2PPV4 95 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 FAM74A7A6NL05 159 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 OR7C2O60412 319 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 CXorf1O96002 111 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 NMBP08949 121 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 C4BPBP20851 252 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 RAB5CP51148 216 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 TAS2R45P59539 299 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 RPL11P62913 178 aaKnown RBP3.61□□□□□ -1.83
LMNB1-208ENST00000504788 UBE2L3P68036 154 aaKnown RBP3.61□□□□□ -1.83
LMNB1-208ENST00000504788 PAFAH1B2P68402 229 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 PSG3Q16557 428 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 PSMG4Q5JS54 123 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 AKR1C8PQ5T2L2 129 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 S100A7AQ86SG5 101 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 ZNF575Q86XF7 245 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 SBSPONQ8IVN8 264 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 ARL6IP6Q8N6S5 226 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 FAM213BQ8TBF2 198 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 MRPL53Q96EL3 112 aaKnown RBP3.61□□□□□ -1.83
LMNB1-208ENST00000504788 NARS2Q96I59 477 aaKnown RBP3.61□□□□□ -1.83
LMNB1-208ENST00000504788 Q9H3A6 140 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 PPP1R14DQ9NXH3 145 aa3.61□□□□□ -1.83
LMNB1-208ENST00000504788 A0A1W2PRE2 83 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 KNCNA6PVL3 124 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 DIRC3C9JPN6 131 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 NPIPB6E9PJ23 425 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 PAX4O43316 350 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ZNF705DP0CH99 300 aaPredicted RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ZNF705BP0CI00 300 aaPredicted RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 RBMY1A1P0DJD3 496 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 RBMY1CP0DJD4 496 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ATF4P18848 351 aaPredicted RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 S100A7P31151 101 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 RANP62826 216 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ICAM4Q14773 271 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 KIR3DS1Q14943 382 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 RBMY1FQ15415 496 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 SAMD13Q5VXD3 122 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 FOXI2Q6ZQN5 318 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 C9orf47Q6ZRZ4 202 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 GTSCR1Q86UQ5 136 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 OR8A1Q8NGG7 326 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 SFT2D1Q8WV19 159 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 BLNKQ8WV28 456 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 TVP23CQ96ET8 276 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 C16orf92Q96LL3 132 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 TM2D3Q9BRN9 247 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 AGPAT4-IT1Q9H0P7 198 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 SRD5A3Q9H8P0 318 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ZMAT5Q9UDW3 170 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ARL2-SNX15V9GYD0 113 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 DNASE2O00115 360 aaPredicted RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 H2AFB1P0C5Y9 115 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 CNN1P51911 297 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 SNRPD3P62318 126 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 PSG9Q00887 426 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 HAGHQ16775 308 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 PRR9Q5T870 116 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 EIF5AL1Q6IS14 154 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 ZFAND2AQ8N6M9 145 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 C2CD4CQ8TF44 421 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 RPUSD4Q96CM3 377 aaKnown RBP3.6□□□□□ -1.83
LMNB1-208ENST00000504788 VGLL1Q99990 258 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 SLC35B3Q9H1N7 401 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 OTORQ9NRC9 128 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 TMEM167BQ9NRX6 74 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 CLEC5AQ9NY25 188 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 KLF12Q9Y4X4 402 aa3.6□□□□□ -1.83
LMNB1-208ENST00000504788 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.83
LMNB1-208ENST00000504788 TRBV20OR9-2A0A075B6H5 130 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms