RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 IBA57Q5T440 356 aaKnown RBP10.13□□□□□ -0.79
LMNA-220ENST00000504687 GOLT1AQ6ZVE7 132 aa10.13□□□□□ -0.79
LMNA-220ENST00000504687 FAM210BQ96KR6 192 aa10.13□□□□□ -0.79
LMNA-220ENST00000504687 AURKAIP1Q9NWT8 199 aaPredicted RBP10.13□□□□□ -0.79
LMNA-220ENST00000504687 HIVEP1P15822 2718 aa10.13□□□□□ -0.79
LMNA-220ENST00000504687 MXRA5Q9NR99 2828 aa10.13□□□□□ -0.79
LMNA-220ENST00000504687 ZNF320A2RRD8 509 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 C19orf71A6NCJ1 209 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 M0R3E3 92 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 CHEK1O14757 476 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 LCN12Q6JVE5 192 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 DUX5Q96PT3 197 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 SRD5A3Q9H8P0 318 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 PSG8Q9UQ74 426 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 TMA7Q9Y2S6 64 aaKnown RBP10.12□□□□□ -0.79
LMNA-220ENST00000504687 ZFHX3Q15911 3703 aa10.12□□□□□ -0.79
LMNA-220ENST00000504687 TGIF2-C20orf24A0A0A6YYL0 155 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 TRAV8-2A0A0B4J237 113 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 NPIPB6E9PJ23 425 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 SOCS3O14543 225 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 OR5I1Q13606 314 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
LMNA-220ENST00000504687 TCTEX1D4Q5JR98 221 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 SAPCD1Q5SSQ6 148 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 RHPN1-AS1Q9BWJ2 59 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 URGCP-MRPS24S4R325 110 aa10.11□□□□□ -0.79
LMNA-220ENST00000504687 SMIM27A0A1W2PRY6 76 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 TMEM213A2RRL7 107 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 ZNF207O43670 478 aaKnown RBP10.1□□□□□ -0.79
LMNA-220ENST00000504687 MGST1P10620 155 aaKnown RBP10.1□□□□□ -0.79
LMNA-220ENST00000504687 FAM3BP58499 235 aaPredicted RBP10.1□□□□□ -0.79
LMNA-220ENST00000504687 TM4SF20Q53R12 229 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 NUDT10Q8NFP7 164 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 OR4B1Q8NGF8 309 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 NUDT11Q96G61 164 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 NRN1Q9NPD7 142 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
LMNA-220ENST00000504687 IGHV4OR15-8A0A075B7B6 117 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 A0A087WW49 117 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 RAB5BP61020 215 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 RPL19P84098 196 aaKnown RBP10.09□□□□□ -0.79
LMNA-220ENST00000504687 COX19Q49B96 90 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 Q71RC1 249 aaPredicted RBP10.09□□□□□ -0.79
LMNA-220ENST00000504687 LINC01006Q8NI28 216 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 RNASE7Q9H1E1 156 aaKnown RBP10.09□□□□□ -0.79
LMNA-220ENST00000504687 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
LMNA-220ENST00000504687 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
LMNA-220ENST00000504687 IGHV3-66A0A0C4DH42 116 aa10.08□□□□□ -0.8
LMNA-220ENST00000504687 LINC01619G3V211 115 aa10.08□□□□□ -0.8
LMNA-220ENST00000504687 GATCO43716 136 aaKnown RBP10.08□□□□□ -0.8
LMNA-220ENST00000504687 HOXD3P31249 432 aaPredicted RBP10.08□□□□□ -0.8
LMNA-220ENST00000504687 PRNTQ86SH4 94 aa10.08□□□□□ -0.8
LMNA-220ENST00000504687 PRR25Q96S07 402 aa10.08□□□□□ -0.8
LMNA-220ENST00000504687 TLN2Q9Y4G6 2542 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 IGHV3-49A0A0A0MS15 119 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 A0A1W2PPQ1 181 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 PHOX2AO14813 284 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
LMNA-220ENST00000504687 FOXA3P55318 350 aaPredicted RBP10.07□□□□□ -0.8
LMNA-220ENST00000504687 SRSF2Q01130 221 aaKnown RBP10.07□□□□□ -0.8
LMNA-220ENST00000504687 RASL11AQ6T310 242 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 NHLRC2Q8NBF2 726 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
LMNA-220ENST00000504687 ANK3Q12955 4377 aaKnown RBP10.07□□□□□ -0.8
LMNA-220ENST00000504687 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 C2orf70A6NJV1 201 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 ZNF705GA8MUZ8 300 aaPredicted RBP10.06□□□□□ -0.8
LMNA-220ENST00000504687 A8MWL6 223 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 OVOL1O14753 267 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 FHL3Q13643 280 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 TCF24Q7RTU0 167 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 GBGT1Q8N5D6 347 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 DCANP1Q8TF63 244 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 ZC2HC1AQ96GY0 325 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 SAV1Q9H4B6 383 aaPredicted RBP10.06□□□□□ -0.8
LMNA-220ENST00000504687 RPP21Q9H633 154 aaKnown RBP10.06□□□□□ -0.8
LMNA-220ENST00000504687 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
LMNA-220ENST00000504687 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
LMNA-220ENST00000504687 LOC105371267A0A1B0GV96 52 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
LMNA-220ENST00000504687 P01737 135 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 CBLN1P23435 193 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 HLA-DMBP28068 263 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 LINC00322Q6ZN03 302 aaPredicted RBP10.05□□□□□ -0.8
LMNA-220ENST00000504687 LURAP1LQ8IV03 231 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 OR1N2Q8NGR9 330 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 DPF1Q92782 380 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
LMNA-220ENST00000504687 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 LINC00477Q96M19 166 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms