RNA–Protein interactions for RNA: ENST00000504355.5

PDLIM3-205, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-205ENST00000504355 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
PDLIM3-205ENST00000504355 MARVELD1Q9BSK0 173 aa11.7□□□□□ -0.54
PDLIM3-205ENST00000504355 OR5AC2Q9NZP5 309 aa11.7□□□□□ -0.54
PDLIM3-205ENST00000504355 HERC2O95714 4834 aa11.7□□□□□ -0.54
PDLIM3-205ENST00000504355 PRM2P04554 102 aa11.69□□□□□ -0.54
PDLIM3-205ENST00000504355 CLINT1Q14677 625 aa11.69□□□□□ -0.54
PDLIM3-205ENST00000504355 OXA1LQ15070 435 aa11.69□□□□□ -0.54
PDLIM3-205ENST00000504355 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
PDLIM3-205ENST00000504355 P0DMU3 169 aa11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 TSPOP30536 169 aa11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 SAT2Q96F10 170 aaPredicted RBP11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 TIMM9Q9Y5J7 89 aa11.68□□□□□ -0.54
PDLIM3-205ENST00000504355 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
PDLIM3-205ENST00000504355 PRAC2D3DTV9 90 aa11.67□□□□□ -0.54
PDLIM3-205ENST00000504355 PET100P0DJ07 73 aa11.67□□□□□ -0.54
PDLIM3-205ENST00000504355 H2BFSP57053 126 aa11.67□□□□□ -0.54
PDLIM3-205ENST00000504355 PPP1R1CQ8WVI7 109 aa11.67□□□□□ -0.54
PDLIM3-205ENST00000504355 C17orf112F2Z3M2 114 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 H0YIZ8 118 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 AZU1P20160 251 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 TAS2R60P59551 318 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 KCNIP2Q9NS61 270 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 TMEM14CQ9P0S9 112 aa11.66□□□□□ -0.54
PDLIM3-205ENST00000504355 TRBV19A0A075B6N1 114 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 J3KRW8 73 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 ZNF253O75346 499 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 PYYP10082 97 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 HIST1H1EP10412 219 aaKnown RBP11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 GCSAMLQ5JQS6 135 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 POM121L12Q8N7R1 296 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.54
PDLIM3-205ENST00000504355 H7BYZ3 331 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 MPC2O95563 127 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 LEPP41159 167 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 CCDC28AQ8IWP9 274 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 ATP5SQ99766 215 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 C20orf144Q9BQM9 153 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
PDLIM3-205ENST00000504355 PDE6HQ13956 83 aa11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 FCN2Q15485 313 aa11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 MIR17HGQ75NE6 70 aa11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 SCGB1C1Q8TD33 95 aa11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 MRPL53Q96EL3 112 aaKnown RBP11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 TIMM8BQ9Y5J9 83 aaPredicted RBP11.63□□□□□ -0.55
PDLIM3-205ENST00000504355 NPIPB6E9PJ23 425 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 M0R3E3 92 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 IFNA5P01569 189 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 CT45A10P0DMU9 189 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 KIR3DS1Q14943 382 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 TMEM88Q6PEY1 159 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 EXOC3-AS1Q8N2X6 119 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 MRPL32Q9BYC8 188 aaKnown RBP11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 HSPB11Q9Y547 144 aa11.62□□□□□ -0.55
PDLIM3-205ENST00000504355 TRAV12-3A0A0B4J271 114 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 F5H768 121 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 NDUFB4O95168 129 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 ERCC8Q13216 396 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 ICAM4Q14773 271 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 TMEM263Q8WUH6 116 aaKnown RBP11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 NOP10Q9NPE3 64 aaKnown RBP11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
PDLIM3-205ENST00000504355 PLAC8L1A1L4L8 177 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 CBY3A6NI87 242 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 OR7C2O60412 319 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 ATP5G1P05496 136 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 NBEAP1P0C6P0 100 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 ATP5G3P48201 142 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 FAM122CQ6P4D5 195 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 LINC00477Q96M19 166 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 FUT9Q9Y231 359 aa11.6□□□□□ -0.55
PDLIM3-205ENST00000504355 SNURFLB1AK76 121 aa11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 OR10J4P0C629 311 aa11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 C15orf53Q8NAA6 179 aa11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 RNASE8Q8TDE3 154 aaKnown RBP11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 RNF141Q8WVD5 230 aa11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
PDLIM3-205ENST00000504355 M0R2N4 97 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms