RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ARPC1AQ92747 370 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 FAM106CPP0CH98 169 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 EBI3Q14213 229 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 FAM106AQ4KMX7 169 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 SMG1Q96Q15 3661 aaKnown RBP11.69□□□□□ -0.54
SNF8-203ENST00000504000 CEP250Q9BV73 2442 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 C7orf71A4D174 169 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 EGR2P11161 476 aaPredicted RBP11.69□□□□□ -0.54
SNF8-203ENST00000504000 LOXL1Q08397 574 aaPredicted RBP11.69□□□□□ -0.54
SNF8-203ENST00000504000 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 Q8N6K4 173 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 FER1L6-AS1Q8NA97 138 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
SNF8-203ENST00000504000 CST9LQ9H4G1 147 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
SNF8-203ENST00000504000 A6NDN8 102 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 H3BRM9 83 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 CKS2P33552 79 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 RAB9AP51151 201 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 NHLH1Q02575 133 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 ANKRD39Q53RE8 183 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
SNF8-203ENST00000504000 BCL6BQ8N143 479 aaPredicted RBP11.68□□□□□ -0.54
SNF8-203ENST00000504000 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 OR8A1Q8NGG7 326 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 TIMD4Q96H15 378 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 ASCL2Q99929 193 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 HILPDAQ9Y5L2 63 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 ZNF318Q5VUA4 2279 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 CTSGP08311 255 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 PSMG3-AS1Q96PY0 264 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
SNF8-203ENST00000504000 TIMM8BQ9Y5J9 83 aaPredicted RBP11.68□□□□□ -0.54
SNF8-203ENST00000504000 LOC389332A0A1B0GUA5 103 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 RBAKDNA6NC62 111 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 CBY3A6NI87 242 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
SNF8-203ENST00000504000 HSD52Q0P140 79 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 OCIAD2Q56VL3 154 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 MINOS1Q5TGZ0 78 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 ZNF575Q86XF7 245 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 MINOS1-NBL1R4GNA1 71 aa11.67□□□□□ -0.54
SNF8-203ENST00000504000 IGKV2-40A0A087WW87 121 aaPredicted RBP11.66□□□□□ -0.54
SNF8-203ENST00000504000 TRAV8-6A0A0B4J262 113 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 IGKV2D-40P01614 121 aaPredicted RBP11.66□□□□□ -0.54
SNF8-203ENST00000504000 IGHG4P01861 327 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 SMAD5-AS1Q9Y6J3 95 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 MGAQ8IWI9 3026 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 A1L4Q6 167 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 FABP5P3A8MUU1 101 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 NPYP01303 97 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 CACNG7P62955 275 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 HES1Q14469 280 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 TWIST1Q15672 202 aa11.66□□□□□ -0.54
SNF8-203ENST00000504000 TMSB15BA0A087X1C1 80 aa11.65□□□□□ -0.54
SNF8-203ENST00000504000 ADAMTSL5Q6ZMM2 481 aa11.65□□□□□ -0.54
SNF8-203ENST00000504000 LINC01560Q8TB33 94 aa11.65□□□□□ -0.54
SNF8-203ENST00000504000 MAP1LC3AQ9H492 121 aa11.65□□□□□ -0.54
SNF8-203ENST00000504000 MAP1BP46821 2468 aaKnown RBP11.64□□□□□ -0.55
SNF8-203ENST00000504000 NDUFS7O75251 213 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
SNF8-203ENST00000504000 NDPQ00604 133 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 UFSP1Q6NVU6 142 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 GTF2H5Q6ZYL4 71 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 NXT2Q9NPJ8 142 aaKnown RBP11.64□□□□□ -0.55
SNF8-203ENST00000504000 ANKRD11Q6UB99 2663 aaPredicted RBP11.64□□□□□ -0.55
SNF8-203ENST00000504000 ZNF292O60281 2723 aa11.64□□□□□ -0.55
SNF8-203ENST00000504000 K7ERU9 68 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
SNF8-203ENST00000504000 VGLL1Q99990 258 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 S4R3C0 116 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 PCNX1Q96RV3 2341 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 BSNQ9UPA5 3926 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 GAGE10A6NGK3 116 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 FCER1GP30273 86 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 FOXE3Q13461 319 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 SMPXQ9UHP9 88 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
SNF8-203ENST00000504000 POLEQ07864 2286 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 ERASQ7Z444 233 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 HIGD1BQ9P298 99 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 ADGRG4Q8IZF6 3080 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 ZZEF1O43149 2961 aa11.62□□□□□ -0.55
SNF8-203ENST00000504000 NCBP2LA6PVI3 153 aaKnown RBP11.61□□□□□ -0.55
SNF8-203ENST00000504000 PRSS47A8MTI9 375 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 SNAI2O43623 268 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 TCF15Q12870 199 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 KLRD1Q13241 179 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 AP1S3Q96PC3 154 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 IGHV7-81A0A0B4J1V7 117 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 K7ENP7 123 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms