RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-204ENST00000503492 TSTD3H0UI37 97 aa17.35■□□□□ 0.37
PCDH1-204ENST00000503492 TRGV3P03979 118 aa17.35■□□□□ 0.37
PCDH1-204ENST00000503492 A0A087X0K7 114 aa17.35■□□□□ 0.37
PCDH1-204ENST00000503492 COX6B1P14854 86 aa17.35■□□□□ 0.37
PCDH1-204ENST00000503492 SIGLECL1Q8N7X8 197 aa17.35■□□□□ 0.37
PCDH1-204ENST00000503492 IGHV3OR16-13A0A075B7E8 117 aa17.34■□□□□ 0.37
PCDH1-204ENST00000503492 IGHV3-74A0A0B4J1X5 117 aa17.34■□□□□ 0.37
PCDH1-204ENST00000503492 ZNF207O43670 478 aaKnown RBP17.34■□□□□ 0.37
PCDH1-204ENST00000503492 IGHG2P01859 326 aa17.34■□□□□ 0.37
PCDH1-204ENST00000503492 RELQ04864 619 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-204ENST00000503492 KLF5Q13887 457 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-204ENST00000503492 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.34■□□□□ 0.37
PCDH1-204ENST00000503492 VGLL1Q99990 258 aa17.34■□□□□ 0.37
PCDH1-204ENST00000503492 ZNF462Q96JM2 2506 aa17.34■□□□□ 0.37
PCDH1-204ENST00000503492 A1L4Q6 167 aa17.33■□□□□ 0.37
PCDH1-204ENST00000503492 CT45A10P0DMU9 189 aa17.33■□□□□ 0.37
PCDH1-204ENST00000503492 SLC25A16P16260 332 aa17.33■□□□□ 0.37
PCDH1-204ENST00000503492 HAX1O00165 279 aa17.33■□□□□ 0.36
PCDH1-204ENST00000503492 PPIFP30405 207 aaKnown RBP17.33■□□□□ 0.36
PCDH1-204ENST00000503492 BLCAPP62952 87 aa17.33■□□□□ 0.36
PCDH1-204ENST00000503492 LCN12Q6JVE5 192 aa17.33■□□□□ 0.36
PCDH1-204ENST00000503492 PRR25Q96S07 402 aa17.33■□□□□ 0.36
PCDH1-204ENST00000503492 ATP6V0BQ99437 205 aa17.33■□□□□ 0.36
PCDH1-204ENST00000503492 RNF114Q9Y508 228 aa17.33■□□□□ 0.36
PCDH1-204ENST00000503492 UTP20O75691 2785 aaKnown RBP17.33■□□□□ 0.36
PCDH1-204ENST00000503492 IGHV3-49A0A0A0MS15 119 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 AMTP48728 403 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 METTL26Q96S19 204 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 A0A096LNT2 108 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 ZNF324O75467 553 aaPredicted RBP17.32■□□□□ 0.36
PCDH1-204ENST00000503492 PMCHP20382 165 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 Q6ZS46 218 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 COX8CQ7Z4L0 72 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 Q8TAT8 98 aa17.32■□□□□ 0.36
PCDH1-204ENST00000503492 GATA3P23771 443 aa17.31■□□□□ 0.36
PCDH1-204ENST00000503492 U3KQE9 123 aa17.31■□□□□ 0.36
PCDH1-204ENST00000503492 DDTP30046 118 aa17.31■□□□□ 0.36
PCDH1-204ENST00000503492 SAPCD1Q5SSQ6 148 aa17.31■□□□□ 0.36
PCDH1-204ENST00000503492 C1orf194Q5T5A4 169 aa17.31■□□□□ 0.36
PCDH1-204ENST00000503492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDH1-204ENST00000503492 SH2D1AO60880 128 aa17.3■□□□□ 0.36
PCDH1-204ENST00000503492 ARMS2P0C7Q2 107 aa17.3■□□□□ 0.36
PCDH1-204ENST00000503492 NRN1Q9NPD7 142 aa17.3■□□□□ 0.36
PCDH1-204ENST00000503492 FBLL1A6NHQ2 334 aaKnown RBP17.3■□□□□ 0.36
PCDH1-204ENST00000503492 M0QZK8 103 aa17.3■□□□□ 0.36
PCDH1-204ENST00000503492 FAM19A2Q8N3H0 131 aa17.3■□□□□ 0.36
PCDH1-204ENST00000503492 RNF182Q8N6D2 247 aa17.3■□□□□ 0.36
PCDH1-204ENST00000503492 CRYBG3Q68DQ2 2970 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 A0A1B0GUT8 65 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 PRAC2D3DTV9 90 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 TRBV12-3P01733 135 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 ARL3P36405 182 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 LINC01356Q8N9X3 169 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 ZNF705DP0CH99 300 aaPredicted RBP17.29■□□□□ 0.36
PCDH1-204ENST00000503492 ZNF705BP0CI00 300 aaPredicted RBP17.29■□□□□ 0.36
PCDH1-204ENST00000503492 FAM162BQ5T6X4 162 aa17.29■□□□□ 0.36
PCDH1-204ENST00000503492 NIT1Q86X76 327 aa17.28■□□□□ 0.36
PCDH1-204ENST00000503492 SLC50A1Q9BRV3 221 aa17.28■□□□□ 0.36
PCDH1-204ENST00000503492 BRI3O95415 125 aa17.28■□□□□ 0.36
PCDH1-204ENST00000503492 ZNF80P51504 273 aaPredicted RBP17.28■□□□□ 0.36
PCDH1-204ENST00000503492 KLK15Q9H2R5 256 aa17.28■□□□□ 0.36
PCDH1-204ENST00000503492 FAM208BQ5VWN6 2430 aa17.27■□□□□ 0.36
PCDH1-204ENST00000503492 ERCC8Q13216 396 aa17.27■□□□□ 0.36
PCDH1-204ENST00000503492 CELSR2Q9HCU4 2923 aa17.27■□□□□ 0.35
PCDH1-204ENST00000503492 TMSB15BA0A087X1C1 80 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 TMEM189A5PLL7 270 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 H3BUA1 57 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 DEFA6Q01524 100 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 MAPK1IP1LQ8NDC0 245 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 LOC102724200A0A096LPH7 203 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-204ENST00000503492 TRAV8-2A0A0B4J237 113 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 NTF3P20783 257 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 RIGQ13278 110 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 URB1-AS1Q96HZ7 61 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 TPPP3Q9BW30 176 aa17.26■□□□□ 0.35
PCDH1-204ENST00000503492 KRTDAPP60985 99 aa17.25■□□□□ 0.35
PCDH1-204ENST00000503492 Q6AWC8 147 aa17.25■□□□□ 0.35
PCDH1-204ENST00000503492 UNQ9165/PRO28630Q6UXU0 137 aa17.25■□□□□ 0.35
PCDH1-204ENST00000503492 C14orf144Q96I85 54 aa17.25■□□□□ 0.35
PCDH1-204ENST00000503492 USMG5Q96IX5 58 aa17.25■□□□□ 0.35
PCDH1-204ENST00000503492 IGHV3-11P01762 117 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 PF4V1P10720 104 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 FAM209BQ5JX69 171 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 C8orf86Q6ZUL3 223 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 Q8N976 141 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 GATD1Q8NB37 220 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 CSMD2Q7Z408 3487 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 FBN2P35556 2912 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 HSBP1O75506 76 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 KRTAP10-9P60411 292 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 DEFB112Q30KQ8 113 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 RNASEKQ6P5S7 137 aaKnown RBP17.24■□□□□ 0.35
PCDH1-204ENST00000503492 NDFIP1Q9BT67 221 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 CSPG4Q6UVK1 2322 aa17.24■□□□□ 0.35
PCDH1-204ENST00000503492 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
PCDH1-204ENST00000503492 RBAKDNA6NC62 111 aa17.23■□□□□ 0.35
PCDH1-204ENST00000503492 TEX43Q6ZNM6 134 aa17.23■□□□□ 0.35
PCDH1-204ENST00000503492 LCNL1Q6ZST4 164 aa17.23■□□□□ 0.35
PCDH1-204ENST00000503492 TDRG1Q3Y452 100 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms