RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 TAAR5O14804 337 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 OR10J4P0C629 311 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 RBMY1A1P0DJD3 496 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 RBMY1CP0DJD4 496 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 RBMY1FQ15415 496 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 Q6ZNX1 250 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 OR10G4Q8NGN3 311 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 OR10G9Q8NGN4 311 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 OR10G7Q8NGN6 311 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
PDLIM7-209ENST00000503346 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 M0R2Z0 102 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 M0R3E3 92 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 DEFB4AO15263 64 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 CRXO43186 299 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 MBP02144 154 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 UBE2L3P68036 154 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 FAM122CQ6P4D5 195 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 C1orf158Q8N1D5 194 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 OR11H4Q8NGC9 324 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 GNPNAT1Q96EK6 184 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 SH3BGRL3Q9H299 93 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
PDLIM7-209ENST00000503346 CSMD3Q7Z407 3707 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 SMIM9A6NGZ8 99 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 JTBO76095 146 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 ZNF345Q14585 488 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 CYTL1Q9NRR1 136 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
PDLIM7-209ENST00000503346 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
PDLIM7-209ENST00000503346 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDLIM7-209ENST00000503346 INSP01308 110 aa13.15□□□□□ -0.3
PDLIM7-209ENST00000503346 ICAM4Q14773 271 aa13.15□□□□□ -0.3
PDLIM7-209ENST00000503346 LYPD1Q8N2G4 141 aa13.15□□□□□ -0.3
PDLIM7-209ENST00000503346 KCNRGQ8N5I3 272 aa13.15□□□□□ -0.3
PDLIM7-209ENST00000503346 IGHV3OR16-12A0A075B7B8 117 aa13.14□□□□□ -0.31
PDLIM7-209ENST00000503346 CDKN1BP46527 198 aa13.14□□□□□ -0.31
PDLIM7-209ENST00000503346 CDC34P49427 236 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-209ENST00000503346 BAP18Q8IXM2 172 aa13.14□□□□□ -0.31
PDLIM7-209ENST00000503346 C11orf45Q8TAV5 145 aa13.14□□□□□ -0.31
PDLIM7-209ENST00000503346 ODF3Q96PU9 254 aa13.14□□□□□ -0.31
PDLIM7-209ENST00000503346 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
PDLIM7-209ENST00000503346 STAG3L2P0CL84 134 aa13.13□□□□□ -0.31
PDLIM7-209ENST00000503346 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
PDLIM7-209ENST00000503346 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
PDLIM7-209ENST00000503346 ST6GAL2Q96JF0 529 aa13.13□□□□□ -0.31
PDLIM7-209ENST00000503346 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
PDLIM7-209ENST00000503346 CXorf65A6NEN9 183 aa13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 HMGB3O15347 200 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 TSPOP30536 169 aa13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 RAB24Q969Q5 203 aa13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 ACTR3CQ9C0K3 210 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 Q9H3A6 140 aa13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 DYNC2H1Q8NCM8 4307 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-209ENST00000503346 A0A0D9SG52 128 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 TMEM189A5PLL7 270 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 HBE1P02100 147 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 NANOS2P60321 138 aaKnown RBP13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 C9orf47Q6ZRZ4 202 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 LINC00477Q96M19 166 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
PDLIM7-209ENST00000503346 PLECQ15149 4684 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 NUPR2A6NF83 97 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 ARL14EPLP0DKL9 152 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 LEPP41159 167 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 ERCC8Q13216 396 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 RRN3P1Q2M238 152 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 SUN5Q8TC36 379 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 C20orf144Q9BQM9 153 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
PDLIM7-209ENST00000503346 IGKV2-40A0A087WW87 121 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-209ENST00000503346 IGKV2D-40P01614 121 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-209ENST00000503346 CSN1S1P47710 185 aa13.09□□□□□ -0.31
PDLIM7-209ENST00000503346 CEMP1Q6PRD7 247 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-209ENST00000503346 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-209ENST00000503346 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
PDLIM7-209ENST00000503346 BCL2L11O43521 198 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 GCHFRP30047 84 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 KIR3DS1Q14943 382 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 AKR1C8PQ5T2L2 129 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 GFI1BQ5VTD9 330 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 RXFP4Q8TDU9 374 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 CELA1Q9UNI1 258 aa13.08□□□□□ -0.32
PDLIM7-209ENST00000503346 SACSQ9NZJ4 4579 aa13.07□□□□□ -0.32
PDLIM7-209ENST00000503346 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
PDLIM7-209ENST00000503346 KANTRA0A1W2PQU2 76 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms