RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ZNF664Q8N3J9 261 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 OR51T1Q8NGJ9 327 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 OR5H2Q8NGV7 314 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 LINC01006Q8NI28 216 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 SLC25A40Q8TBP6 338 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 RPS4Y2Q8TD47 263 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 GNPNAT1Q96EK6 184 aaPredicted RBP3□□□□□ -1.93
HMGB1P21-201ENST00000502313 BORCS8Q96FH0 119 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZNF799Q96GE5 643 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZNF414Q96IQ9 312 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 CCL13Q99616 98 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 VGLL1Q99990 258 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 CHST6Q9GZX3 395 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 SPANXA1Q9NS26 97 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 KCNIP2Q9NS61 270 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 ASF1BQ9NVP2 202 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 TMEM38BQ9NVV0 291 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 MPC1Q9Y5U8 109 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZNF407Q9C0G0 2248 aa3□□□□□ -1.93
HMGB1P21-201ENST00000502313 ACANP16112 2415 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 DNAJC13O75165 2243 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 TRAV4A0A0B4J268 109 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 IGHV3-66A0A0C4DH42 116 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 IGHV1-69-2A0A0G2JMI3 117 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 PINLYPA6NC86 204 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZFP92A6NM28 416 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 A8MUN3 132 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZNF736B4DX44 427 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 MCRIP1C9JLW8 97 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ATP6V1G2-DDX39BF2Z307 99 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 F8W036 122 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 TRAPPC2LH3BP13 241 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 J3KT08 172 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 J3QRK9 145 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 K7EP13 123 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 DEGS1O15121 323 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 SOCS1O15524 211 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 LYRM1O43325 122 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 AKAIN1P0CW23 69 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 TRAPPC2P0DI81 140 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 TRAPPC2BP0DI82 140 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 MT3P25713 68 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 BLVRBP30043 206 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 TGFBR1P36897 503 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 RPS11P62280 158 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 KISS1Q15726 138 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 KRTAP24-1Q3LI83 254 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 RNF212Q495C1 297 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 Q6ZTC4 211 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ORMDL3Q8N138 153 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 C14orf178Q8N769 122 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 TMEM229BQ8NBD8 167 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 OR4A5Q8NH83 315 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 OR5P3Q8WZ94 311 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 PLEKHB2Q96CS7 222 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 HSPB9Q9BQS6 159 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 C2orf88Q9BSF0 95 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 OR2H1Q9GZK4 316 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 C11orf68Q9H3H3 251 aaKnown RBP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 GPR84Q9NQS5 396 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 MMP26Q9NRE1 261 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 CACFD1Q9UGQ2 172 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 MRPS16Q9Y3D3 137 aaKnown RBP2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 LHFPL6Q9Y693 200 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ANK2Q01484 3957 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZGRF1Q86YA3 2104 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 ABCA4P78363 2273 aa2.99□□□□□ -1.93
HMGB1P21-201ENST00000502313 FLNAP21333 2647 aaKnown RBP2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 IGLV1-50A0A075B6I6 118 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 IGKV1-12A0A0C4DH73 117 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 A0A0G2JMM0 328 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 LOC107986453A0A1B0GWG9 222 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 A0A1W2PPB8 328 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 A0A1W2PRS3 328 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 SNRPGP15A8MWD9 76 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 KIR3DP1A8MWS1 328 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 CXorf1O96002 111 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 IGKV1D-12P01611 117 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 HLA-DQB1P01920 261 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 APOA2P02652 100 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZNF32P17041 273 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 NPY1RP25929 384 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 CNTFRP26992 372 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 CA7P43166 264 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 CAV3P56539 151 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 GNG2P59768 71 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 LYZP61626 148 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 ATP5G2Q06055 141 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 BSPH1Q075Z2 132 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 TFF3Q07654 80 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 HIGD2BQ4VC39 106 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 PABPC1L2AQ5JQF8 200 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 Q6ZS49 121 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 TMEM256Q8N2U0 113 aa2.98□□□□□ -1.93
HMGB1P21-201ENST00000502313 C12orf45Q8N5I9 185 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms