RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 NHLH1Q02575 133 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 LY6DQ14210 128 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 RABAC1Q9UI14 185 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 CELSR1Q9NYQ6 3014 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 OR4C46A6NHA9 309 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 IGHG4P01861 327 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 FAM106CPP0CH98 169 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 TSPOP30536 169 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 ECSCRQ19T08 205 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 Q8TAT8 98 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 TMEM208Q9BTX3 173 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 SERTM2A0A1B0GWG4 89 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 ATP6V0E1O15342 81 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 GPR183P32249 361 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 SAA4P35542 130 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 UBE2E1P51965 193 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 C15orf32Q32M92 178 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 Q6AWC8 147 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 LYZL1Q6UWQ5 148 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 STPG4Q8N801 248 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 TP73-AS1Q9UF72 201 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 LAMTOR2Q9Y2Q5 125 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 A0A1B0GW15 77 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 TMEM213A2RRL7 107 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 TMEM189A5PLL7 270 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 RELQ04864 619 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-204ENST00000501271 COL5A1-AS1Q5SY13 56 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 UNQ5815/PRO19632Q6UWF5 114 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 FAM110DQ8TAY7 271 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-204ENST00000501271 ZNF502Q8TBZ5 544 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 PRR25Q96S07 402 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 VGLL1Q99990 258 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 BPESC1Q9GZL8 116 aa7.66□□□□□ -1.18
CLIP1-204ENST00000501271 ABCA2Q9BZC7 2435 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 C20orf202A1L168 122 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 DLEU1O43261 78 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 ZNF80P51504 273 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-204ENST00000501271 EFNA4P52798 201 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 ZNF493Q6ZR52 646 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 COX8CQ7Z4L0 72 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 MCRIP2Q9BUT9 160 aaKnown RBP7.65□□□□□ -1.18
CLIP1-204ENST00000501271 ZFAND3Q9H8U3 227 aa7.65□□□□□ -1.18
CLIP1-204ENST00000501271 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 hDV102S1A0JD36 115 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 SCGB2A1O75556 95 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 LMO4P61968 165 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 MUC21Q5SSG8 566 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 TIMM8BQ9Y5J9 83 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-204ENST00000501271 G3V318 75 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 OR5AL1P0C617 328 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 RHOGP84095 191 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 ZNF124Q15973 351 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 SAPCD1Q5SSQ6 148 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 CCDC140Q96MF4 163 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 AP5S1Q9NUS5 200 aa7.64□□□□□ -1.19
CLIP1-204ENST00000501271 MRPS16Q9Y3D3 137 aaKnown RBP7.64□□□□□ -1.19
CLIP1-204ENST00000501271 D6R8Y8 96 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 H0Y8G0 127 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 C19orf84I3L1E1 186 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 CLEC3BP05452 202 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 NPSP0C0P6 89 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 UQCRFS1P47985 274 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 HINT1P49773 126 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-204ENST00000501271 FAM106AQ4KMX7 169 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 AMN1Q8IY45 258 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 ARL6IP6Q8N6S5 226 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 MAP1LC3CQ9BXW4 147 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 KLK9Q2XQG4 91 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 ZNF575Q86XF7 245 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 ITLN2Q8WWU7 325 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-204ENST00000501271 KLK9Q9UKQ9 250 aa7.63□□□□□ -1.19
CLIP1-204ENST00000501271 IGHV3-66A0A0C4DH42 116 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 CLPSL1A2RUU4 121 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 PRAC2D3DTV9 90 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 BUB3O43684 328 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 IFI27P40305 119 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-204ENST00000501271 LOXL1Q08397 574 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-204ENST00000501271 GAGE1Q13065 139 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 OXLD1Q5BKU9 147 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 FAM104BQ5XKR9 115 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 RNF182Q8N6D2 247 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 TMEM191AQ9H0A3 160 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 A0A096LNJ9 63 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 CENPVL3A0A0U1RRI6 287 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 NPFFO15130 113 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 ERCC8Q13216 396 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 PET117Q6UWS5 81 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 CLEC19AQ6UXS0 136 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 FA2HQ7L5A8 372 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 PRSS3P2Q8NHM4 247 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 PSMG3-AS1Q96PY0 264 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 ST20Q9HBF5 79 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 U3KQK5 164 aa7.62□□□□□ -1.19
CLIP1-204ENST00000501271 IGHV3OR16-13A0A075B7E8 117 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms