RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 PSG3Q16557 428 aa13□□□□□ -0.33
ZCCHC3-201ENST00000500893 VMO1Q7Z5L0 202 aa13□□□□□ -0.33
ZCCHC3-201ENST00000500893 TWIST1Q15672 202 aa13□□□□□ -0.33
ZCCHC3-201ENST00000500893 FAM120AOSQ5T036 256 aa13□□□□□ -0.33
ZCCHC3-201ENST00000500893 D6R8Y8 96 aa13□□□□□ -0.33
ZCCHC3-201ENST00000500893 IFI27P40305 119 aaPredicted RBP13□□□□□ -0.33
ZCCHC3-201ENST00000500893 CRIP1P50238 77 aa13□□□□□ -0.33
ZCCHC3-201ENST00000500893 TLN2Q9Y4G6 2542 aa12.99□□□□□ -0.33
ZCCHC3-201ENST00000500893 ZNF414Q96IQ9 312 aa12.99□□□□□ -0.33
ZCCHC3-201ENST00000500893 ZNF492Q9P255 531 aa12.99□□□□□ -0.33
ZCCHC3-201ENST00000500893 H3BRN7 92 aa12.99□□□□□ -0.33
ZCCHC3-201ENST00000500893 ZFP30Q9Y2G7 519 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 PLP1P60201 277 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 C18orf15Q96N68 181 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 A0A087X0K7 114 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 NBL1P41271 181 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 NHLH1Q02575 133 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 ERCC8Q13216 396 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 RNF182Q8N6D2 247 aa12.98□□□□□ -0.33
ZCCHC3-201ENST00000500893 LOXL1Q08397 574 aaPredicted RBP12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 FAM162BQ5T6X4 162 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 FANCD2OSQ96PS1 177 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 VGLL1Q99990 258 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 IGKV3-7A0A075B6H7 116 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 SH2D1AO60880 128 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 C1RLQ9NZP8 487 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 THYN1Q9P016 225 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 TMEM14CQ9P0S9 112 aa12.97□□□□□ -0.33
ZCCHC3-201ENST00000500893 LY6LH3BQJ8 138 aa12.96□□□□□ -0.33
ZCCHC3-201ENST00000500893 ZFP36P26651 326 aaKnown RBP12.96□□□□□ -0.33
ZCCHC3-201ENST00000500893 RNF24Q9Y225 148 aa12.96□□□□□ -0.33
ZCCHC3-201ENST00000500893 UQCRFS1P47985 274 aa12.96□□□□□ -0.34
ZCCHC3-201ENST00000500893 CT83Q5H943 113 aa12.96□□□□□ -0.34
ZCCHC3-201ENST00000500893 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.34
ZCCHC3-201ENST00000500893 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.34
ZCCHC3-201ENST00000500893 PKD1L2Q7Z442 2459 aa12.96□□□□□ -0.34
ZCCHC3-201ENST00000500893 G3V318 75 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 CLEC3BP05452 202 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 CKS2P33552 79 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 CHCHD1Q96BP2 118 aaKnown RBP12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 C15orf32Q32M92 178 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 TMEM219Q86XT9 240 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 CFHR4Q92496 578 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 SMIM12Q96EX1 92 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 GFRA4Q9GZZ7 299 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 MSRB1Q9NZV6 116 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
ZCCHC3-201ENST00000500893 HAX1O00165 279 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 PRTN3P24158 256 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 EVI2AP22794 236 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 RNF151Q2KHN1 245 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 ZNF562Q6V9R5 426 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 ZNF738Q8NE65 137 aa12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
ZCCHC3-201ENST00000500893 SETD2Q9BYW2 2564 aaPredicted RBP12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 OR10AG1Q8NH19 301 aa12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 NEU4Q8WWR8 484 aaPredicted RBP12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 NDFIP1Q9BT67 221 aa12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 USP9XQ93008 2570 aaPredicted RBP12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 PRSS47A8MTI9 375 aa12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
ZCCHC3-201ENST00000500893 EGR2P11161 476 aaPredicted RBP12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 RHOGP84095 191 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 CCDC144NLQ6NUI1 221 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 LINC01548A6NM66 108 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 S100A7AQ86SG5 101 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 NAA38Q9BRA0 125 aaKnown RBP12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 IGLV11-55A0A075B6I3 123 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 TRAV30A0A087WSZ9 112 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 CCL25O15444 150 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 OR11H6Q8NGC7 330 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 RNF5Q99942 180 aa12.92□□□□□ -0.34
ZCCHC3-201ENST00000500893 CACNG7P62955 275 aa12.91□□□□□ -0.34
ZCCHC3-201ENST00000500893 SORL1Q92673 2214 aa12.91□□□□□ -0.34
ZCCHC3-201ENST00000500893 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
ZCCHC3-201ENST00000500893 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
ZCCHC3-201ENST00000500893 CTSGP08311 255 aa12.91□□□□□ -0.34
ZCCHC3-201ENST00000500893 LRRK2Q5S007 2527 aa12.91□□□□□ -0.34
ZCCHC3-201ENST00000500893 SPRY2O43597 315 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 SIGLEC8Q9NYZ4 499 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 NMUP48645 174 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 TM4SF20Q53R12 229 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 ORMDL3Q8N138 153 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 PRR25Q96S07 402 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 A0A1W2PPR1 153 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 ATP6V0E1O15342 81 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 PTPN13Q12923 2485 aa12.9□□□□□ -0.34
ZCCHC3-201ENST00000500893 SCGB2A1O75556 95 aa12.89□□□□□ -0.35
ZCCHC3-201ENST00000500893 IGHV7-81A0A0B4J1V7 117 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms