RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 GTSCR1Q86UQ5 136 aa14.52□□□□□ -0.08
LINC01550-201ENST00000499006 CCDC28AQ8IWP9 274 aa14.52□□□□□ -0.08
LINC01550-201ENST00000499006 ZNF705FA8MVS1 300 aaPredicted RBP14.51□□□□□ -0.09
LINC01550-201ENST00000499006 SUMO1P63165 101 aaKnown RBP14.51□□□□□ -0.09
LINC01550-201ENST00000499006 Q8N1Y9 231 aa14.51□□□□□ -0.09
LINC01550-201ENST00000499006 PRR25Q96S07 402 aa14.51□□□□□ -0.09
LINC01550-201ENST00000499006 OR11H12B2RN74 326 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 ARL6IP6Q8N6S5 226 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 ZNF738Q8NE65 137 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 NOTCH1P46531 2555 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 IFNA1P01562 189 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 BCL2P10415 239 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 ATP5G3P48201 142 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 DEFB1P60022 68 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 ZNF124Q15973 351 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 HAGHQ16775 308 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 CST9LP1Q5W188 147 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 APRG1Q8IVJ8 170 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 C5orf17Q8NAS9 161 aa14.5□□□□□ -0.09
LINC01550-201ENST00000499006 RPUSD4Q96CM3 377 aaKnown RBP14.5□□□□□ -0.09
LINC01550-201ENST00000499006 PRAC2D3DTV9 90 aa14.49□□□□□ -0.09
LINC01550-201ENST00000499006 TAGLN2P37802 199 aaKnown RBP14.49□□□□□ -0.09
LINC01550-201ENST00000499006 RXFP4Q8TDU9 374 aa14.49□□□□□ -0.09
LINC01550-201ENST00000499006 FAM210AQ96ND0 272 aa14.49□□□□□ -0.09
LINC01550-201ENST00000499006 RARRES2Q99969 163 aa14.49□□□□□ -0.09
LINC01550-201ENST00000499006 WFDC10AQ9H1F0 79 aa14.49□□□□□ -0.09
LINC01550-201ENST00000499006 LOC102723971A0A1B0GUV8 181 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 RBFOX3A6NFN3 312 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 C11orf94C9JXX5 98 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 F6UB75 175 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 SLC25A5P05141 298 aaKnown RBP14.48□□□□□ -0.09
LINC01550-201ENST00000499006 GDF5OSQ5U4N7 250 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 TXNDC17Q9BRA2 123 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 SAV1Q9H4B6 383 aaPredicted RBP14.48□□□□□ -0.09
LINC01550-201ENST00000499006 VAX2Q9UIW0 290 aa14.48□□□□□ -0.09
LINC01550-201ENST00000499006 DIRC3C9JPN6 131 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 PRB4P10163 310 aaPredicted RBP14.47□□□□□ -0.09
LINC01550-201ENST00000499006 GNG5P63218 68 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 MEF2BQ02080 365 aaPredicted RBP14.47□□□□□ -0.09
LINC01550-201ENST00000499006 ZNF506Q5JVG8 444 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 FOXI2Q6ZQN5 318 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 CMTM2Q8TAZ6 248 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 CITED4Q96RK1 184 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 TCEAL7Q9BRU2 100 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 EPDR1Q9UM22 224 aa14.47□□□□□ -0.09
LINC01550-201ENST00000499006 A0A0J9YX75 114 aa14.46□□□□□ -0.09
LINC01550-201ENST00000499006 CSN1S1P47710 185 aa14.46□□□□□ -0.09
LINC01550-201ENST00000499006 DEFB125Q8N687 156 aa14.46□□□□□ -0.09
LINC01550-201ENST00000499006 KNCNA6PVL3 124 aa14.45□□□□□ -0.1
LINC01550-201ENST00000499006 TCRAP04437 139 aa14.45□□□□□ -0.1
LINC01550-201ENST00000499006 OR8A1Q8NGG7 326 aa14.45□□□□□ -0.1
LINC01550-201ENST00000499006 ZNF705DP0CH99 300 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-201ENST00000499006 ZNF705BP0CI00 300 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-201ENST00000499006 HLA-DRB4P13762 266 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 TOR2AQ5JU69 321 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 ACTL10Q5JWF8 245 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 HIST1H2BAQ96A08 127 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 ATG101Q9BSB4 218 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 HLA-DRB4X5D2U9 266 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 IGKV2-40A0A087WW87 121 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-201ENST00000499006 RBAKDNA6NC62 111 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 A8MTW9 85 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 H3BMM0 161 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 IGKV2D-40P01614 121 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-201ENST00000499006 EBLN2Q6P2I7 272 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 EIF5A2Q9GZV4 153 aaKnown RBP14.44□□□□□ -0.1
LINC01550-201ENST00000499006 RPH3ALQ9UNE2 315 aa14.44□□□□□ -0.1
LINC01550-201ENST00000499006 SERTM2A0A1B0GWG4 89 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 SCO2A0A1W2PP80 73 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 PEX7O00628 323 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 C9orf47Q6ZRZ4 202 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 GOLT1AQ6ZVE7 132 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 CYB561D1Q8N8Q1 229 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 MED9Q9NWA0 146 aa14.43□□□□□ -0.1
LINC01550-201ENST00000499006 AURKAIP1Q9NWT8 199 aaPredicted RBP14.43□□□□□ -0.1
LINC01550-201ENST00000499006 NPIPB6E9PJ23 425 aa14.42□□□□□ -0.1
LINC01550-201ENST00000499006 PDE6DO43924 150 aa14.42□□□□□ -0.1
LINC01550-201ENST00000499006 NDUFS6O75380 124 aaKnown RBP14.42□□□□□ -0.1
LINC01550-201ENST00000499006 CNN1P51911 297 aaKnown RBP14.42□□□□□ -0.1
LINC01550-201ENST00000499006 HIST1H1AQ02539 215 aaPredicted RBP14.42□□□□□ -0.1
LINC01550-201ENST00000499006 OR10J6PQ8NGY7 276 aa14.42□□□□□ -0.1
LINC01550-201ENST00000499006 C11orf52Q96A22 123 aa14.42□□□□□ -0.1
LINC01550-201ENST00000499006 CLUHP3Q96NS8 147 aa14.42□□□□□ -0.1
LINC01550-201ENST00000499006 VGLL1Q99990 258 aa14.42□□□□□ -0.1
LINC01550-201ENST00000499006 F6UZH7 168 aa14.41□□□□□ -0.1
LINC01550-201ENST00000499006 DUSP14O95147 198 aaKnown RBP14.41□□□□□ -0.1
LINC01550-201ENST00000499006 TRPT1Q86TN4 253 aaKnown RBP14.41□□□□□ -0.1
LINC01550-201ENST00000499006 STHQ8IWL8 128 aa14.41□□□□□ -0.1
LINC01550-201ENST00000499006 C2CD4CQ8TF44 421 aa14.41□□□□□ -0.1
LINC01550-201ENST00000499006 AGPAT4-IT1Q9H0P7 198 aa14.41□□□□□ -0.1
LINC01550-201ENST00000499006 SRD5A3Q9H8P0 318 aa14.41□□□□□ -0.1
LINC01550-201ENST00000499006 RAB19A4D1S5 217 aa14.4□□□□□ -0.1
LINC01550-201ENST00000499006 LINC00862A6NCI5 91 aa14.4□□□□□ -0.1
LINC01550-201ENST00000499006 A8MZ25 164 aa14.4□□□□□ -0.1
LINC01550-201ENST00000499006 IGLV2-11P01706 119 aa14.4□□□□□ -0.1
LINC01550-201ENST00000499006 PRB2P02812 416 aaPredicted RBP14.4□□□□□ -0.1
LINC01550-201ENST00000499006 IGHV4-30-4P0DP06 118 aa14.4□□□□□ -0.1
LINC01550-201ENST00000499006 SRSF3P84103 164 aaKnown RBP14.4□□□□□ -0.1
LINC01550-201ENST00000499006 ERCC8Q13216 396 aa14.4□□□□□ -0.1
LINC01550-201ENST00000499006 LINC00479Q96M42 142 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms