RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ZNF876PQ49A33 203 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 PRR9Q5T870 116 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 OR8G2PQ6IF36 304 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 FP248Q71RG6 208 aaPredicted RBP2.47□□□□□ -2.01
CSTF1-207ENST00000498689 ARPINQ7Z6K5 226 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 FAM89BQ8N5H3 189 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 NANOGP1Q8N7R0 232 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 SLC24A4Q8NFF2 622 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 TSKUQ8WUA8 353 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 SECTM1Q8WVN6 248 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 FCAMRQ8WWV6 532 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 NPIPB3Q92617 1050 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 TEX12Q9BXU0 123 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 ARGLU1Q9NWB6 273 aaPredicted RBP2.47□□□□□ -2.01
CSTF1-207ENST00000498689 COMMD9Q9P000 198 aa2.47□□□□□ -2.01
CSTF1-207ENST00000498689 ELF5Q9UKW6 265 aaPredicted RBP2.47□□□□□ -2.01
CSTF1-207ENST00000498689 C7orf71A4D174 169 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 GAGE12JA6NER3 117 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 SLC22A5O76082 557 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 PTHLHP12272 177 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 CASQ1P31415 396 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 SNCAP37840 140 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 LPAR6P43657 344 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 RPL5P46777 297 aaKnown RBP2.46□□□□□ -2.02
CSTF1-207ENST00000498689 RPS11P62280 158 aaKnown RBP eCLIP2.46□□□□□ -2.02
CSTF1-207ENST00000498689 GAGE1Q13065 139 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 GAGE4Q13068 117 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 GAGE5Q13069 117 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 HIGD2BQ4VC39 106 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 MPV17L2Q567V2 206 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 C12orf73Q69YU5 71 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 FAM219AQ8IW50 185 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 DHRSXQ8N5I4 330 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 CYB561D1Q8N8Q1 229 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 C15orf56Q8N910 161 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 NRACQ8N912 160 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 OR4D10Q8NGI6 311 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 OR10G9Q8NGN4 311 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 RFKQ969G6 155 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 RAB24Q969Q5 203 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 ACY3Q96HD9 319 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 SLC50A1Q9BRV3 221 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 FKBP11Q9NYL4 201 aa2.46□□□□□ -2.02
CSTF1-207ENST00000498689 IGKV1D-37A0A075B6S9 117 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 A0A087WZ39 114 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 F5H697 171 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 EIF3GO75821 320 aaKnown RBP eCLIP2.45□□□□□ -2.02
CSTF1-207ENST00000498689 ANGP03950 147 aaKnown RBP2.45□□□□□ -2.02
CSTF1-207ENST00000498689 SNRPCP09234 159 aaKnown RBP2.45□□□□□ -2.02
CSTF1-207ENST00000498689 SEC11BP0C7V7 166 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 PSMB9P28065 219 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 RNASE4P34096 147 aaKnown RBP2.45□□□□□ -2.02
CSTF1-207ENST00000498689 NUP62P37198 522 aaPredicted RBP2.45□□□□□ -2.02
CSTF1-207ENST00000498689 HSPE1P61604 102 aaKnown RBP2.45□□□□□ -2.02
CSTF1-207ENST00000498689 ELOBQ15370 118 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 RHOHQ15669 191 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 HSP90B2PQ58FF3 399 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 Q6Q795 121 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 ZNF818PQ6ZRF7 136 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 NSMCE2Q96MF7 247 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 KIR2DL4Q99706 377 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 PRADC1Q9BSG0 188 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 PRRG3Q9BZD7 231 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 WFDC1Q9HC57 220 aa2.45□□□□□ -2.02
CSTF1-207ENST00000498689 A0A087WWL8 130 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 CORTO00230 105 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 RGS16O15492 202 aaPredicted RBP2.44□□□□□ -2.02
CSTF1-207ENST00000498689 MPDU1O75352 247 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 IGKV1-39P01597 117 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 IGKV1D-39P04432 117 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 LEPP41159 167 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 RAB5CP51148 216 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 FLOT2Q14254 428 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 MIAQ16674 131 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 HACD4Q5VWC8 232 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 ZNF546Q86UE3 836 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 OR56B1Q8NGI3 324 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 OR4A16Q8NH70 328 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 TMEM170AQ8WVE7 144 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 LINC00474Q9P2X8 69 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 CKLFQ9UBR5 152 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 SLC45A2Q9UMX9 530 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 TMEM56-RWDD3S4R434 201 aa2.44□□□□□ -2.02
CSTF1-207ENST00000498689 TRBV6-4A0A1B0GX49 114 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 FBLL1A6NHQ2 334 aaKnown RBP2.43□□□□□ -2.02
CSTF1-207ENST00000498689 CRYM-AS1A6NIL9 109 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 KLLNB2CW77 178 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 RLN1P04808 185 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 SLC25A5P05141 298 aaKnown RBP2.43□□□□□ -2.02
CSTF1-207ENST00000498689 UBBP0CG47 229 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 CATR1Q13166 79 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 OPCMLQ14982 345 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 P2RY14Q15391 338 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 BSXQ3C1V8 233 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 HSD17B12Q53GQ0 312 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 C9orf116Q5BN46 136 aaPredicted RBP2.43□□□□□ -2.02
CSTF1-207ENST00000498689 ACBD7Q8N6N7 88 aa2.43□□□□□ -2.02
CSTF1-207ENST00000498689 HOPXQ9BPY8 73 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms