RNA–Protein interactions for RNA: ENST00000498648.5

STRADB-210, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-210ENST00000498648 H3BPC8 53 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 K7EM74 188 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 IGKV1-16P04430 117 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 ZNF22P17026 224 aaPredicted RBP2.89□□□□□ -1.95
STRADB-210ENST00000498648 EVX1P49640 407 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 PLXNA3P51805 1871 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 EIF5AP63241 154 aaKnown RBP2.89□□□□□ -1.95
STRADB-210ENST00000498648 EIF3IQ13347 325 aaKnown RBP2.89□□□□□ -1.95
STRADB-210ENST00000498648 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 TMEM136Q6ZRR5 245 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 BPIFA4PQ86YQ2 179 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 DEFB106AQ8N104 65 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 YIPF3Q9GZM5 350 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 OTORQ9NRC9 128 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 COPZ2Q9P299 210 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 FAM215AQ9Y5M1 114 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 PLXNB2O15031 1838 aa2.89□□□□□ -1.95
STRADB-210ENST00000498648 SPEGQ15772 3267 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 CEP295Q9C0D2 2601 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 COLCA2A8K830 154 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 OR2T1O43869 369 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 GGCTO75223 188 aaKnown RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 DNAH10OSP0CZ25 163 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 CD52P31358 61 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 SRP14P37108 136 aaKnown RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 MORN2Q502X0 79 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 BCL2L15Q5TBC7 163 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 NCBP2-AS2Q69YL0 99 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 MIR17HGQ75NE6 70 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 C4orf33Q8N1A6 199 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 HIST3H2BBQ8N257 126 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 RNASE11Q8TAA1 199 aaKnown RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 IMMP2LQ96T52 175 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 OR2H1Q9GZK4 316 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 POPDC3Q9HBV1 291 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 OSTCQ9NRP0 149 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 TXNL4BQ9NX01 149 aaKnown RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 PAIP2BQ9ULR5 123 aaKnown RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 TECTAO75443 2155 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 NUP210LQ5VU65 1888 aa2.88□□□□□ -1.95
STRADB-210ENST00000498648 NUP210Q8TEM1 1887 aaPredicted RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 HELZ2Q9BYK8 2649 aaKnown RBP2.88□□□□□ -1.95
STRADB-210ENST00000498648 PTPRSQ13332 1948 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 FRYQ5TBA9 3013 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 TRAV40A0A0B4J280 105 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 TMEM235A6NFC5 223 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 H3BT86 120 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 GABARAPH6UMI1 98 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 RPL36A-HNRNPH2H7BZ11 118 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 K7EP13 123 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 TMEM256-PLSCR3K7ERE1 68 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 TNFSF15O95150 251 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 C1QCP02747 245 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 MSMBP08118 114 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 MPC1LP0DKB6 136 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 ZNF728P0DKX0 622 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 RNASE4P34096 147 aaKnown RBP2.87□□□□□ -1.95
STRADB-210ENST00000498648 SLC38A11Q08AI6 406 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 FOXF1Q12946 379 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 CTAGE3PQ8IX95 158 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 DYNAPQ8N1N2 210 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 FGF13Q92913 245 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 SCGB3A1Q96QR1 104 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 OR8B2Q96RD0 313 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 PKMYT1Q99640 499 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 NAT8Q9UHE5 227 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 KLK12Q9UKR0 248 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 GBF1Q92538 1859 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 MCM3APO60318 1980 aa2.87□□□□□ -1.95
STRADB-210ENST00000498648 NBEAQ8NFP9 2946 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 C9JAW5 83 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 CREBL2O60519 120 aaPredicted RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 EDF1O60869 148 aaKnown RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 SCTP09683 121 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 UBBP0CG47 229 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 LGALS3P17931 250 aaKnown RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 CMPK1P30085 196 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 RPL28P46779 137 aaKnown RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 DNLZQ5SXM8 178 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 OR8I2Q8N0Y5 310 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 Q8NDZ9 215 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 OR2T10Q8NGZ9 312 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 PFN4Q8NHR9 129 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 ZC2HC1AQ96GY0 325 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 YPEL2Q96QA6 119 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 MRPL32Q9BYC8 188 aaKnown RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 CACYBPQ9HB71 228 aaKnown RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 NAT8BQ9UHF3 227 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 HIGD1AQ9Y241 93 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 RNF11Q9Y3C5 154 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 ZNF236Q9UL36 1845 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 USP9XQ93008 2570 aaPredicted RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 OBSL1O75147 1896 aa2.86□□□□□ -1.95
STRADB-210ENST00000498648 SMG1Q96Q15 3661 aaKnown RBP2.86□□□□□ -1.95
STRADB-210ENST00000498648 ITPR1Q14643 2758 aa2.85□□□□□ -1.95
STRADB-210ENST00000498648 ODAMA1E959 279 aa2.85□□□□□ -1.95
STRADB-210ENST00000498648 TP53I11O14683 189 aa2.85□□□□□ -1.95
STRADB-210ENST00000498648 SULT1C4O75897 302 aa2.85□□□□□ -1.95
STRADB-210ENST00000498648 P0DMU3 169 aa2.85□□□□□ -1.95
STRADB-210ENST00000498648 FAM231AP0DMU4 169 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms