RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SSSCA1O60232 199 aa10.01□□□□□ -0.81
TRAF4-212ENST00000498540 FAUP35544 74 aaKnown RBP10.01□□□□□ -0.81
TRAF4-212ENST00000498540 ICAM4Q14773 271 aa10.01□□□□□ -0.81
TRAF4-212ENST00000498540 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
TRAF4-212ENST00000498540 ZNF431Q8TF32 576 aaPredicted RBP10.01□□□□□ -0.81
TRAF4-212ENST00000498540 PYGO2Q9BRQ0 406 aa10.01□□□□□ -0.81
TRAF4-212ENST00000498540 GSN-AS1Q9NRJ2 163 aa10.01□□□□□ -0.81
TRAF4-212ENST00000498540 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 FABP12A6NFH5 140 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 IFNA5P01569 189 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 METTL15P1P0C7V9 234 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 TNFSF8P32971 234 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 LEPP41159 167 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 HAMPP81172 84 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 TEPPQ6URK8 271 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 BPIFA4PQ86YQ2 179 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 C18orf15Q96N68 181 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 ODF3Q96PU9 254 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 NPVFQ9HCQ7 196 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 RNF24Q9Y225 148 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 FUT9Q9Y231 359 aa10□□□□□ -0.81
TRAF4-212ENST00000498540 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 H3BQ15 152 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 IGLC2P0DOY2 106 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 OPCMLQ14982 345 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 PXDC1Q5TGL8 231 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 TMEM14EPQ6UXP3 125 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 MCFD2Q8NI22 146 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 SAT2Q96F10 170 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-212ENST00000498540 SMIM8Q96KF7 97 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 SLC25A21Q9BQT8 299 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-212ENST00000498540 PXMP4Q9Y6I8 212 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
TRAF4-212ENST00000498540 FNDC10F2Z333 226 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 GOSR2O14653 212 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 AGPAT2O15120 278 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 PAX4O43316 350 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 ZNF546Q86UE3 836 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 TOMM5Q8N4H5 51 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 ZNF680Q8NEM1 530 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 TMEM37Q8WXS4 190 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
TRAF4-212ENST00000498540 MGAT4CQ9UBM8 478 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 KLF12Q9Y4X4 402 aa9.98□□□□□ -0.81
TRAF4-212ENST00000498540 COX7A2P2O60397 106 aa9.97□□□□□ -0.81
TRAF4-212ENST00000498540 ZNF324O75467 553 aaPredicted RBP9.97□□□□□ -0.81
TRAF4-212ENST00000498540 IGHV3-53P01767 116 aa9.97□□□□□ -0.81
TRAF4-212ENST00000498540 AP3S2P59780 193 aa9.97□□□□□ -0.81
TRAF4-212ENST00000498540 ARL16Q0P5N6 197 aa9.97□□□□□ -0.81
TRAF4-212ENST00000498540 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
TRAF4-212ENST00000498540 C7orf71A4D174 169 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 SPINK4O60575 86 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
TRAF4-212ENST00000498540 GCSHP23434 173 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 CD300CQ08708 224 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 BTN1A1Q13410 526 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 LYPD5Q6UWN5 251 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 RAB2BQ8WUD1 216 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 ST6GAL2Q96JF0 529 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 MGST2Q99735 147 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 LINC00467Q9BRT7 94 aa9.96□□□□□ -0.82
TRAF4-212ENST00000498540 MRPS26Q9BYN8 205 aaKnown RBP9.96□□□□□ -0.82
TRAF4-212ENST00000498540 TRAV5A0A0B4J249 113 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 C9orf170A2RU37 121 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 KLLNB2CW77 178 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 TCL1AP56279 114 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 ERCC8Q13216 396 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 ANXA2RQ3ZCQ2 193 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 C4orf46Q504U0 113 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 PYDC2Q56P42 97 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 C10orf113Q5VZT2 155 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 Q6ZSN1 163 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 EIF4E3Q8N5X7 224 aaKnown RBP9.95□□□□□ -0.82
TRAF4-212ENST00000498540 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
TRAF4-212ENST00000498540 LY96Q9Y6Y9 160 aa9.95□□□□□ -0.82
TRAF4-212ENST00000498540 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 M0R3E3 92 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 SCGB1D2O95969 90 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 CRYBA4P53673 196 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 UBE2MP61081 183 aaKnown RBP9.94□□□□□ -0.82
TRAF4-212ENST00000498540 WFDC10BQ8IUB3 73 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 C8orf49Q96NF6 230 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 MSRB1Q9NZV6 116 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 RCL1Q9Y2P8 373 aaKnown RBP9.94□□□□□ -0.82
TRAF4-212ENST00000498540 V9GYH0 126 aa9.94□□□□□ -0.82
TRAF4-212ENST00000498540 PRAF2O60831 178 aa9.93□□□□□ -0.82
TRAF4-212ENST00000498540 TSC22D2O75157 780 aa9.93□□□□□ -0.82
TRAF4-212ENST00000498540 RNASE4P34096 147 aaKnown RBP9.93□□□□□ -0.82
TRAF4-212ENST00000498540 GUK1Q16774 197 aa9.93□□□□□ -0.82
TRAF4-212ENST00000498540 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
TRAF4-212ENST00000498540 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 J3QL48 77 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 OR4E1P0C645 316 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 TMBIM6P55061 237 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 FHL2Q14192 279 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 MRPL23Q16540 153 aaKnown RBP9.92□□□□□ -0.82
TRAF4-212ENST00000498540 IBA57Q5T440 356 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms