RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	VPREB3	Q9UKI3	123 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ARL2-SNX15	V9GYD0	113 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	WNK2	Q9Y3S1	2297 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325		A0A0G2JLM5	398 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325		A0A1W2PRE2	83 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PSMB11	A5LHX3	300 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C11orf94	C9JXX5	98 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGKV1-17	P01599	117 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TRGV3	P03979	118 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CLEC3B	P05452	202 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CTSG	P08311	255 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PPIF	P30405	207 aa	Known RBP	4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	UBE2G2	P60604	165 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	BLCAP	P62952	87 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SLC35B1	P78383	322 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	REL	Q04864	619 aa	Predicted RBP	4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF674	Q2M3X9	581 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C15orf32	Q32M92	178 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM95	Q3KNT9	176 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	KHDC1L	Q5JSQ8	128 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF491	Q8N8L2	437 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR5AU1	Q8NGC0	362 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR4F5	Q8NH21	305 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF502	Q8TBZ5	544 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MS4A10	Q96PG2	267 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR4F4	Q96R69	305 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NIPSNAP3B	Q9BS92	247 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C2orf88	Q9BSF0	95 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PAXX	Q9BUH6	204 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NPFFR1	Q9GZQ6	430 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PPP1R14D	Q9NXH3	145 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MRPL27	Q9P0M9	148 aa	Known RBP	4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	DOK5	Q9P104	306 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LINC00527	Q9UJ94	153 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	DNAH1	Q9P2D7	4330 aa		4.09	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TRBV24-1	A0A075B6N3	115 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TRAV5	A0A0B4J249	113 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	OR2T8	A6NH00	312 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	ZNF727	A8MUV8	499 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325		H3BQ15	152 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	BMPR1B	O00238	502 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	IL4	P05112	153 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	DDT	P30046	118 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	RAB9A	P51151	201 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	NDUFA6	P56556	154 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TPPP2	P59282	170 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TAS2R60	P59551	318 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	UBE2L3	P68036	154 aa	Known RBP	4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	ELOB	Q15370	118 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TMEM241	Q24JQ0	296 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	PYY3	Q5JQD4	70 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	CLEC19A	Q6UXS0	136 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	MRPL52	Q86TS9	123 aa	Known RBP	4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	BPIFA4P	Q86YQ2	179 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	HIST3H2BB	Q8N257	126 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	SIGLECL1	Q8N7X8	197 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	CYB561D1	Q8N8Q1	229 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TMEM190	Q8WZ59	177 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	ISOC2	Q96AB3	205 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	RPUSD4	Q96CM3	377 aa	Known RBP	4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	RNF125	Q96EQ8	232 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	BTF3L4	Q96K17	158 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	FAM167A-AS1	Q96KT0	104 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	SLC25A2	Q9BXI2	301 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	GNB4	Q9HAV0	340 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TMEM14C	Q9P0S9	112 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	RABAC1	Q9UI14	185 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325		S4R3C0	116 aa		4.08	□□□□□ -1.76
HMGXB4-208	ENST00000498325	PLXNB1	O43157	2135 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325		H3BRN7	92 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	CLDN34	H7C241	214 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	GCG	P01275	180 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	IGHV3-23	P01764	117 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	IGHG4	P01861	327 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	NBEAP1	P0C6P0	100 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	HIST1H1E	P10412	219 aa	Known RBP	4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	RAB4A	P20338	218 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	GPR183	P32249	361 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	AKR1C3	P42330	323 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	ATP5G3	P48201	142 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	COA6	Q5JTJ3	125 aa	Known RBP	4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	FAM90A2P	Q658T7	463 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	TEX38	Q6PEX7	206 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	OR4F17	Q8NGA8	305 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	OR10D4P	Q8NGN7	298 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	ZNF418	Q8TF45	676 aa	Predicted RBP	4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	C14orf144	Q96I85	54 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	SMIM7	Q9BQ49	75 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	SHANK2-AS3	Q9BTD1	123 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	CHRDL1	Q9BU40	450 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	PARL	Q9H300	379 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	SDF2L1	Q9HCN8	221 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	NAT8	Q9UHE5	227 aa		4.07	□□□□□ -1.76
HMGXB4-208	ENST00000498325	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.06	□□□□□ -1.76
HMGXB4-208	ENST00000498325	HELT	A6NFD8	242 aa		4.06	□□□□□ -1.76
HMGXB4-208	ENST00000498325	IFITM10	A6NMD0	228 aa		4.06	□□□□□ -1.76
HMGXB4-208	ENST00000498325	HIST1H2BK	O60814	126 aa		4.06	□□□□□ -1.76

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