RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 TIMM23O14925 209 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 LEPROTO15243 131 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 CCL25O15444 150 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 C1QTNF4Q9BXJ3 329 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 PLA2G5P39877 138 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 LINC00158P58513 81 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 PRB3Q04118 309 aaPredicted RBP12.17□□□□□ -0.46
C4A-259ENST00000498271 GAGE5Q13069 117 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 GAGE6Q13070 117 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 LY6G5BQ8NDX9 201 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 TMEM14BQ9NUH8 114 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.16□□□□□ -0.46
C4A-259ENST00000498271 GATA3P23771 443 aa12.16□□□□□ -0.46
C4A-259ENST00000498271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
C4A-259ENST00000498271 SMKR1H3BMG3 65 aa12.16□□□□□ -0.46
C4A-259ENST00000498271 IGHG3P01860 377 aa12.16□□□□□ -0.46
C4A-259ENST00000498271 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
C4A-259ENST00000498271 CDPF1Q6NVV7 123 aa12.16□□□□□ -0.46
C4A-259ENST00000498271 GAGE2AQ6NT46 116 aa12.16□□□□□ -0.46
C4A-259ENST00000498271 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 IGHV1-8P0DP01 117 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 MALP21145 153 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 RSPO1Q2MKA7 263 aaPredicted RBP12.15□□□□□ -0.46
C4A-259ENST00000498271 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.46
C4A-259ENST00000498271 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 PRR31Q5SQ13 230 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 C1orf122Q6ZSJ8 110 aa12.15□□□□□ -0.46
C4A-259ENST00000498271 ITLN2Q8WWU7 325 aaPredicted RBP12.15□□□□□ -0.46
C4A-259ENST00000498271 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.47
C4A-259ENST00000498271 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.47
C4A-259ENST00000498271 FCN3O75636 299 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 CFHR2P36980 270 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 LYNX1G3V0Z9 82 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 LYNX1P0DP58 116 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 LMO1P25800 156 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
C4A-259ENST00000498271 WIPF3A6NGB9 483 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 TMEM200BQ69YZ2 307 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 MBD3L4A6NDZ8 208 aaPredicted RBP12.13□□□□□ -0.47
C4A-259ENST00000498271 MBD3L3A6NE82 208 aaPredicted RBP12.13□□□□□ -0.47
C4A-259ENST00000498271 MBD3L5A6NJ08 208 aaPredicted RBP12.13□□□□□ -0.47
C4A-259ENST00000498271 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 LINC00205P59089 165 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 Q6ZS92 163 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 MBD3L2Q8NHZ7 208 aaPredicted RBP12.13□□□□□ -0.47
C4A-259ENST00000498271 SIGLEC9Q9Y336 463 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 TMEM14CQ9P0S9 112 aa12.13□□□□□ -0.47
C4A-259ENST00000498271 IGKV1D-17A0A075B6S4 117 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 TRACP01848 142 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 HLA-DMBP28068 263 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 PMVKQ15126 192 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 C14orf178Q8N769 122 aaPredicted RBP12.12□□□□□ -0.47
C4A-259ENST00000498271 Q8TAT8 98 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
C4A-259ENST00000498271 MRPL51Q4U2R6 128 aaKnown RBP12.12□□□□□ -0.47
C4A-259ENST00000498271 MINOS1Q5TGZ0 78 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 MINOS1-NBL1R4GNA1 71 aa12.12□□□□□ -0.47
C4A-259ENST00000498271 TMEM213A2RRL7 107 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 HLA-DRB4P13762 266 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 C15orf32Q32M92 178 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
C4A-259ENST00000498271 SIGLEC8Q9NYZ4 499 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 HLA-DRB4X5D2U9 266 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 SOCS3O14543 225 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 PAX4O43316 350 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 H3BMG7 143 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 IGLV3-1P01715 115 aa12.11□□□□□ -0.47
C4A-259ENST00000498271 IGHV3-11P01762 117 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 NPC2P61916 151 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 TCF15Q12870 199 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 F8VRH5 84 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 C12orf74Q32Q52 190 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
C4A-259ENST00000498271 DTX1Q86Y01 620 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 GAFA1Q96PS6 74 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 ZNF503-AS2A6NEH8 195 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 NDUFB8O95169 186 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 ZNF474Q6S9Z5 364 aaPredicted RBP12.1□□□□□ -0.47
C4A-259ENST00000498271 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 KIAA1671Q9BY89 1806 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 TRBV19A0A075B6N1 114 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 JPT2Q9H910 190 aa12.1□□□□□ -0.47
C4A-259ENST00000498271 ZNF407Q9C0G0 2248 aa12.09□□□□□ -0.47
C4A-259ENST00000498271 LINC01356Q8N9X3 169 aa12.09□□□□□ -0.47
C4A-259ENST00000498271 ZNF747Q9BV97 191 aa12.09□□□□□ -0.47
C4A-259ENST00000498271 LAMTOR3Q9UHA4 124 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms