RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 CLASP1Q7Z460 1538 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 GLI3P10071 1580 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 LAMC1P11047 1609 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 RAPGEF6Q8TEU7 1601 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 BIVM-ERCC5R4GMW8 1640 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 PPRC1Q5VV67 1664 aaKnown RBP2.05□□□□□ -2.08
CALD1-224ENST00000498254 RBBP6Q7Z6E9 1792 aaKnown RBP2.05□□□□□ -2.08
CALD1-224ENST00000498254 UBR2Q8IWV8 1755 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 FER1L6Q2WGJ9 1857 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 CITO14578 2027 aa2.05□□□□□ -2.08
CALD1-224ENST00000498254 TRAV8-1A0A0A6YYK1 113 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 IGKV1D-43A0A0B4J1Z2 117 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 C7orf77A4D0Y5 90 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 TLCD2A6NGC4 264 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 ZNF860A6NHJ4 632 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 A8MUN3 132 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 A8MWV9 139 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 H3BMM0 161 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 LST1O00453 97 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 UQCRQO14949 82 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 ZNF73O43830 326 aaPredicted RBP2.04□□□□□ -2.08
CALD1-224ENST00000498254 MAPKBP1O60336 1514 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 NDUFB6O95139 128 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 SLC25A5P05141 298 aaKnown RBP2.04□□□□□ -2.08
CALD1-224ENST00000498254 CXCL1P09341 107 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 CUX1P39880 1505 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 INPP1P49441 399 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 LINC00313P59037 77 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 TAS2R45P59539 299 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 FOXF1Q12946 379 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 TARBP1Q13395 1621 aaKnown RBP2.04□□□□□ -2.08
CALD1-224ENST00000498254 KIF14Q15058 1648 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 ADIRFQ15847 76 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 RRN3P1Q2M238 152 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 IQSEC2Q5JU85 1478 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 CDC42BPAQ5VT25 1732 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 IGFL1Q6UW32 110 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 AMTNQ6UX39 209 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 IGFL3Q6UXB1 125 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 Q6ZS49 121 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 MON2Q7Z3U7 1717 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 C1orf174Q8IYL3 243 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 C10orf111Q8N326 155 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 C1orf64Q8NEQ6 169 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 OR5C1Q8NGR4 320 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 STAG3L4Q8TBR4 150 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 ZNF721Q8TF20 911 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 LSM10Q969L4 123 aaKnown RBP2.04□□□□□ -2.08
CALD1-224ENST00000498254 UBE2WQ96B02 151 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 S100A16Q96FQ6 103 aaKnown RBP2.04□□□□□ -2.08
CALD1-224ENST00000498254 LINC00526Q96FQ7 95 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 C20orf78Q9BR46 151 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 IMUPQ9GZP8 106 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 AGPAT4-IT1Q9H0P7 198 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 C16orf95Q9H693 158 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 NAA60Q9H7X0 242 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 ST20Q9HBF5 79 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 ITSN2Q9NZM3 1697 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 CACFD1Q9UGQ2 172 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 LINC00527Q9UJ94 153 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 PHLDA3Q9Y5J5 127 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 SPCS1Q9Y6A9 102 aa2.04□□□□□ -2.08
CALD1-224ENST00000498254 TNRC6AQ8NDV7 1962 aaKnown RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 MYH8P13535 1937 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 DENND4CQ5VZ89 1909 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 LAMB4A4D0S4 1761 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 ABCA6Q8N139 1617 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 RGS12O14924 1447 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 BLMP54132 1417 aaPredicted RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 TRBV7-6A0A0J9YX20 115 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 C3orf85A0A1B0GTC6 90 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 DPRXA6NFQ7 191 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 H3BMG7 143 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 H3BQ85 93 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 K7ERJ3 54 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 YPEL1O60688 119 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 SNCGO76070 127 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 FSTL3O95633 263 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 LTAP01374 205 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 TRACP01848 142 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 SFTA3P0C7M3 94 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 PYYP10082 97 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 RPL22P35268 128 aaKnown RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 POLR2JP52435 117 aaKnown RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 SNRPD3P62318 126 aaKnown RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 BSPH1Q075Z2 132 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 Q56UQ5 140 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 SPRNQ5BIV9 151 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 BVES-AS1Q5T3Y7 98 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 XAF1Q6GPH4 301 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 MSRB3Q8IXL7 192 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 OR10AC1Q8NH08 325 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 OR10AG1Q8NH19 301 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 OR51H1Q8NH63 302 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 ATP6V0E2Q8NHE4 81 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 RPS4Y2Q8TD47 263 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 GNPNAT1Q96EK6 184 aaPredicted RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 YPEL2Q96QA6 119 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms