RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
HLA-DMB-262ENST00000498020 MRAP2Q96G30 205 aa6.43□□□□□ -1.38
HLA-DMB-262ENST00000498020 SLC50A1Q9BRV3 221 aa6.43□□□□□ -1.38
HLA-DMB-262ENST00000498020 LOC102724200A0A096LPH7 203 aaPredicted RBP6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 GRIFINA4D1Z8 144 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PLP1P60201 277 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PRR20EP86478 221 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PRR20CP86479 221 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PRR20DP86480 221 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PRR20BP86481 221 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PRR20AP86496 221 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 DEFB112Q30KQ8 113 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PMCHL2Q9BQD1 86 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 SIGLEC9Q9Y336 463 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PRTN3P24158 256 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 MLANAQ16655 118 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 FBXL19-AS1Q494R0 122 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PVRIGQ6DKI7 326 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 ZNF600Q6ZNG1 722 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 TMEM170AQ8WVE7 144 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 DERL1Q9BUN8 251 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 RNASE1P07998 156 aaKnown RBP6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PAX1P15863 534 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PIP4P2Q8N4L2 257 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 TRGV2A0A075B6R0 118 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 PGPEP1LA6NFU8 196 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 IGHV2-5P01817 119 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 FMC1Q96HJ9 113 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 LINC01587Q99440 93 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 ASCL2Q99929 193 aa6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 ALKBH7Q9BT30 221 aaPredicted RBP6.42□□□□□ -1.38
HLA-DMB-262ENST00000498020 A0A1W2PPI3 338 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 FABP5P3A8MUU1 101 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 M0R1W7 72 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 TRGV9Q99603 122 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 TRAV8-6A0A0B4J262 113 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 TPTE2P1Q5T6R2 138 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 TTC9CQ8N5M4 171 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 FER1L6-AS1Q8NA97 138 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 OSTCQ9NRP0 149 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 TMEM160Q9NX00 188 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 DUSP14O95147 198 aaKnown RBP6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 RPL35AP18077 110 aaKnown RBP6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 RNF125Q96EQ8 232 aa6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 F11RQ9Y624 299 aaKnown RBP6.41□□□□□ -1.38
HLA-DMB-262ENST00000498020 H3BRM9 83 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 DDTP30046 118 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 DIAPH2-AS1Q14236 149 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 UTF1Q5T230 341 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 ORMDL3Q8N138 153 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 C18orf15Q96N68 181 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 Q9H3A6 140 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 IGHV1-69DA0A0B4J2H0 117 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 OOSP1A8MZH6 123 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 INS-IGF2F8WCM5 200 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 SLC17A3O00476 420 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 IGHV1-69P01742 117 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 WT1-ASQ06250 92 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 LEMD1Q68G75 181 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 C1orf229Q6ZS94 237 aaPredicted RBP6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 C10orf105Q8TEF2 133 aa6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 SRSF8Q9BRL6 282 aaKnown RBP6.4□□□□□ -1.38
HLA-DMB-262ENST00000498020 J3QLI3 93 aa6.4□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGHV2-70P01814 119 aa6.4□□□□□ -1.39
HLA-DMB-262ENST00000498020 RHOGP84095 191 aa6.4□□□□□ -1.39
HLA-DMB-262ENST00000498020 OTORQ9NRC9 128 aa6.4□□□□□ -1.39
HLA-DMB-262ENST00000498020 TRAV5A0A0B4J249 113 aa6.4□□□□□ -1.39
HLA-DMB-262ENST00000498020 C11orf52Q96A22 123 aa6.4□□□□□ -1.39
HLA-DMB-262ENST00000498020 COL27A1Q8IZC6 1860 aaPredicted RBP6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 COL6A5A8TX70 2615 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 APOHP02749 345 aaPredicted RBP6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 PYYP10082 97 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 LDLRAD2Q5SZI1 272 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 HIST3H2BBQ8N257 126 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 PRSS46E5RG02 174 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 ATOH7Q8N100 152 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 CFAP54Q96N23 3096 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 RIPPLY3P57055 190 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 MINOS1Q5TGZ0 78 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 STHQ8IWL8 128 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 DMRT1Q9Y5R6 373 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 MINOS1-NBL1R4GNA1 71 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 NACAE9PAV3 2078 aa6.39□□□□□ -1.39
HLA-DMB-262ENST00000498020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 TYMSP04818 313 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 PYGO2Q9BRQ0 406 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 EPDR1Q9UM22 224 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 MAP1AP78559 2803 aaPredicted RBP6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 TRAV21A0A0B4J279 112 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 MUC21A0A0G2JKD1 596 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 CD7P09564 240 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 MUC21Q5SSG8 566 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 LHFPL4Q7Z7J7 247 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms