RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 PRRG4Q9BZD6 226 aa8.92□□□□□ -0.98
MACF1-225ENST00000497807 DOCK11Q5JSL3 2073 aa8.92□□□□□ -0.98
MACF1-225ENST00000497807 TRAV12-2A0A075B6T6 113 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 MGST1P10620 155 aaKnown RBP8.91□□□□□ -0.98
MACF1-225ENST00000497807 HERV-K104P61576 105 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 ZNF816Q0VGE8 651 aaPredicted RBP8.91□□□□□ -0.98
MACF1-225ENST00000497807 DOCK10Q96BY6 2186 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 TRAV8-4A0A0B4J246 113 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 FAM240AA0A1B0GVK7 77 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 TMEM158Q8WZ71 300 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 Q96M85 177 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 CHAC1Q9BUX1 264 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 HES7Q9BYE0 225 aa8.91□□□□□ -0.98
MACF1-225ENST00000497807 RPUSD1Q9UJJ7 312 aaKnown RBP8.91□□□□□ -0.98
MACF1-225ENST00000497807 NCOA6Q14686 2063 aaPredicted RBP8.91□□□□□ -0.98
MACF1-225ENST00000497807 FAM201AQ5SY85 155 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 GTSCR1Q86UQ5 136 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 NEXN-AS1Q8NBZ9 246 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 BORCS8Q96FH0 119 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 LINC01600Q96MT4 127 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 RNF7Q9UBF6 113 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 PRRC2CQ9Y520 2896 aaKnown RBP8.9□□□□□ -0.98
MACF1-225ENST00000497807 hADV29S1A0JD25 119 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 TIMM23O14925 209 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 PPYP01298 95 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 CCL3P10147 92 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 VPREB1P12018 145 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 Q6ZRU5 148 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 Q71RC1 249 aaPredicted RBP8.9□□□□□ -0.98
MACF1-225ENST00000497807 MRPL55Q7Z7F7 128 aaKnown RBP8.9□□□□□ -0.98
MACF1-225ENST00000497807 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 OTORQ9NRC9 128 aa8.9□□□□□ -0.98
MACF1-225ENST00000497807 KLF13Q9Y2Y9 288 aaPredicted RBP8.9□□□□□ -0.98
MACF1-225ENST00000497807 TRBV20OR9-2A0A075B6H5 130 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 A0A087WWL8 130 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 GP9P14770 177 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 C1orf100Q5SVJ3 147 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 WFDC11Q8NEX6 87 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 CCDC140Q96MF4 163 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 DPH3P1Q9H4G8 78 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 ZNF256Q9Y2P7 627 aaPredicted RBP8.89□□□□□ -0.99
MACF1-225ENST00000497807 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 ATRXP46100 2492 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 SPTA1P02549 2419 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 CST7O76096 145 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 ZNF136P52737 540 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 IGFL3Q6UXB1 125 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 LYZL2Q7Z4W2 148 aa8.89□□□□□ -0.99
MACF1-225ENST00000497807 C15orf62A8K5M9 175 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 LYZL6O75951 148 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 MARCH3Q86UD3 253 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 RPP25LQ8N5L8 163 aaKnown RBP8.88□□□□□ -0.99
MACF1-225ENST00000497807 FOXB1Q99853 325 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 ZNF442Q9H7R0 627 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 LINC00527Q9UJ94 153 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 C17orf51A8MQB3 221 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 C9JCJ5 164 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 EPPINO95925 133 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 GCHFRP30047 84 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 EPDR1Q9UM22 224 aa8.88□□□□□ -0.99
MACF1-225ENST00000497807 TLN1Q9Y490 2541 aaKnown RBP8.88□□□□□ -0.99
MACF1-225ENST00000497807 TRAV17A0A0B4J275 112 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 LINC01548A6NM66 108 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 CTLA4P16410 223 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 COL8A2P25067 703 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 LGALS9BQ3B8N2 356 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 C10orf105Q8TEF2 133 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 IL36RNQ9UBH0 155 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 ZFYVE26Q68DK2 2539 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 GYPBP06028 91 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 EFNA4P52798 201 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 UBE2D3P61077 147 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 UBE2D2P62837 147 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.87□□□□□ -0.99
MACF1-225ENST00000497807 NMNAT3Q96T66 252 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 DEPPQ9NTK1 212 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 ARID1AO14497 2285 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 SMIM27A0A1W2PRY6 76 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 NCBP2LA6PVI3 153 aaKnown RBP8.87□□□□□ -0.99
MACF1-225ENST00000497807 SSSCA1O60232 199 aa8.87□□□□□ -0.99
MACF1-225ENST00000497807 IL4P05112 153 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 UBE2E1P51965 193 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 VKORC1L1Q8N0U8 176 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 SRSF12Q8WXF0 261 aaKnown RBP8.86□□□□□ -0.99
MACF1-225ENST00000497807 UBE2E2Q96LR5 201 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 FOXC2Q99958 501 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 PROK2Q9HC23 129 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 PINLYPA6NC86 204 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 HOXD3P31249 432 aaPredicted RBP8.86□□□□□ -0.99
MACF1-225ENST00000497807 DUTP33316 252 aaKnown RBP8.86□□□□□ -0.99
MACF1-225ENST00000497807 PSMB2P49721 201 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.99
MACF1-225ENST00000497807 OR5AS1Q8N127 324 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 OSTCQ9NRP0 149 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 SERP1Q9Y6X1 66 aa8.86□□□□□ -0.99
MACF1-225ENST00000497807 SMG1Q96Q15 3661 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms