RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 FAM231DQ6ZW35 169 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 PSMB8P28062 276 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 ZNF138P52744 262 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 SRD5A3Q9H8P0 318 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 LENEPQ9Y5L5 61 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 FABP5P3A8MUU1 101 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 ADMP35318 185 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 SYNJ2BPP57105 145 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 RASL11AQ6T310 242 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 EXOC3-AS1Q8N2X6 119 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 J3KRW8 73 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 EREGO14944 169 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 LY6G6DO95868 133 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 GPX1P07203 203 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 TFPI2P48307 235 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 FAM231BA6NCW3 169 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 ATP5L2Q7Z4Y8 100 aa6.48□□□□□ -1.37
USP54-215ENST00000497106 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 IZUMO1RA6ND01 250 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 LINC01548A6NM66 108 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 HOXD3P31249 432 aaPredicted RBP6.47□□□□□ -1.37
USP54-215ENST00000497106 NDUFA6P56556 154 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 RNF151Q2KHN1 245 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 OR11H1Q8NG94 326 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 KCNS1Q96KK3 526 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 MCRIP2Q9BUT9 160 aaKnown RBP6.47□□□□□ -1.37
USP54-215ENST00000497106 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 AURKAIP1Q9NWT8 199 aaPredicted RBP6.47□□□□□ -1.37
USP54-215ENST00000497106 SMIM17P0DL12 118 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 Q8N2B8 174 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 A0A1W2PRX2 142 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 BAGE3Q86Y29 109 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 TSKUQ8WUA8 353 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 LAMA1P25391 3075 aa6.47□□□□□ -1.37
USP54-215ENST00000497106 TRAV25A0A0B4J276 109 aa6.46□□□□□ -1.37
USP54-215ENST00000497106 AMBPP02760 352 aa6.46□□□□□ -1.37
USP54-215ENST00000497106 MYCNOSP40205 109 aa6.46□□□□□ -1.37
USP54-215ENST00000497106 SYT8Q8NBV8 401 aa6.46□□□□□ -1.37
USP54-215ENST00000497106 NUDT11Q96G61 164 aa6.46□□□□□ -1.37
USP54-215ENST00000497106 Q6ZSV7 163 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 NHLRC2Q8NBF2 726 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 VPS25Q9BRG1 176 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 KLK15Q9H2R5 256 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 TCL1AP56279 114 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 DERL1Q9BUN8 251 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 KLF12Q9Y4X4 402 aa6.46□□□□□ -1.38
USP54-215ENST00000497106 NAV2Q8IVL1 2488 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 PHOX2AO14813 284 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 LTAP01374 205 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 PPBPP02775 128 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 HBBP68871 147 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 SNURFLB1AK76 121 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 APCSP02743 223 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 OR2K2Q8NGT1 345 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 ZNF503Q96F45 646 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 IGKV2-40A0A087WW87 121 aaPredicted RBP6.45□□□□□ -1.38
USP54-215ENST00000497106 TRAV2A0A0B4J234 112 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 C20orf202A1L168 122 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 IGKV2D-40P01614 121 aaPredicted RBP6.45□□□□□ -1.38
USP54-215ENST00000497106 TRGC1P0CF51 173 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 CACNG7P62955 275 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 C19orf54Q5BKX5 351 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 TCTEX1D4Q5JR98 221 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 MORN5Q5VZ52 161 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 FAM159AQ6UWV7 190 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 GLMPQ8WWB7 406 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 SAMD10Q9BYL1 202 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 K7EP13 123 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 CCL24O00175 119 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 ASIPP42127 132 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 SNHG12Q9BXW3 62 aa6.45□□□□□ -1.38
USP54-215ENST00000497106 IGHV4OR15-8A0A075B7B6 117 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 A0A087WW49 117 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 F2Z2F3 143 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 CFHR3Q02985 330 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 ELOBQ15370 118 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 PSMG4Q5JS54 123 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 MRPL54Q6P161 138 aaKnown RBP6.44□□□□□ -1.38
USP54-215ENST00000497106 NDUFA11Q86Y39 141 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 OR9G4Q8NGQ1 327 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 TGIF2-C20orf24A0A0A6YYL0 155 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 TRBV7-9A0A0J9YWB2 115 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 A0A1B0GUT8 65 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 SAP30O75446 220 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 SGK494Q96LW2 274 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 KRTAP1-3Q8IUG1 177 aa6.44□□□□□ -1.38
USP54-215ENST00000497106 RNASE8Q8TDE3 154 aaKnown RBP6.44□□□□□ -1.38
USP54-215ENST00000497106 SPAG8Q99932 426 aaPredicted RBP6.44□□□□□ -1.38
USP54-215ENST00000497106 SPG11Q96JI7 2443 aa6.43□□□□□ -1.38
USP54-215ENST00000497106 CRISP2P16562 243 aa6.43□□□□□ -1.38
USP54-215ENST00000497106 SPANXN1Q5VSR9 72 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms