RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 BPESC1Q9GZL8 116 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 IQGAP1P46940 1657 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 IGHV3-13P01766 116 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 EFNA4P52798 201 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 TTTY12Q9BZ98 90 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 FGF23Q9GZV9 251 aaPredicted RBP4.74□□□□□ -1.65
USF3-204ENST00000496826 BCL9O00512 1426 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 ACACAQ13085 2346 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
USF3-204ENST00000496826 PRR19A6NJB7 356 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 ERVH48-1M5A8F1 160 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 C1QCP02747 245 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 COX20Q5RI15 118 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.65
USF3-204ENST00000496826 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 Q8N9W7 124 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 FXYD5Q96DB9 178 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 GFI1Q99684 422 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 MRPS18CQ9Y3D5 142 aaKnown RBP4.73□□□□□ -1.65
USF3-204ENST00000496826 IGHV1-69DA0A0B4J2H0 117 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 TEX49A0A1B0GTD5 131 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 SPINK14Q6IE38 97 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 AMTNQ6UX39 209 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 Q8N8P6 123 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 RHPN1-AS1Q9BWJ2 59 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 IGLV3-16A0A075B6K0 115 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 B5MCH6 92 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 INSL3P51460 131 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 RPS27LQ71UM5 84 aaKnown RBP4.73□□□□□ -1.65
USF3-204ENST00000496826 LENEPQ9Y5L5 61 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 ANKRD36A6QL64 1941 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 IGHV3-72A0A0B4J1Y9 119 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 IGKV6D-41A0A0C4DH26 115 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 C2orf70A6NJV1 201 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 RFLNBQ8N5W9 214 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 APCDD1LQ8NCL9 501 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 XRN1Q8IZH2 1706 aaKnown RBP4.73□□□□□ -1.65
USF3-204ENST00000496826 MYO5AQ9Y4I1 1855 aaKnown RBP4.73□□□□□ -1.65
USF3-204ENST00000496826 DHRS4-AS1Q9P1J3 65 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 PLCE1Q9P212 2302 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 SETBP1Q9Y6X0 1596 aa4.73□□□□□ -1.65
USF3-204ENST00000496826 WDR86Q86TI4 376 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 NUP35Q8NFH5 326 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 IGHV1OR15-1A0A075B7D0 117 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 RNF144BQ7Z419 303 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 DAND5Q8N907 189 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 AMELYQ99218 206 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 LINC00467Q9BRT7 94 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 F8VRH5 84 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 CGAP01215 116 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 PIGYQ3MUY2 71 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 IGHV1OR21-1A0A087WYE8 117 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 CRYGDP07320 174 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 TM4SF4P48230 202 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 UFSP1Q6NVU6 142 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 KLF14Q8TD94 323 aaPredicted RBP4.72□□□□□ -1.65
USF3-204ENST00000496826 CELA1Q9UNI1 258 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 PREX1Q8TCU6 1659 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 hDV102S1A0JD36 115 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 SNAI2O43623 268 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 NPSP0C0P6 89 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 PAX9P55771 341 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 C1QL3Q5VWW1 255 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 COLQQ9Y215 455 aaPredicted RBP4.72□□□□□ -1.65
USF3-204ENST00000496826 NCOA6Q14686 2063 aaPredicted RBP4.72□□□□□ -1.65
USF3-204ENST00000496826 TRIAP1O43715 76 aa4.72□□□□□ -1.65
USF3-204ENST00000496826 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
USF3-204ENST00000496826 IGHV4-28A0A0C4DH34 117 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 A0A0J9YW62 118 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 K7EP34 96 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 MED14OSP0DP75 135 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 COX8AP10176 69 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 RBAKDNA6NC62 111 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 C1QL4Q86Z23 238 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 WFDC10AQ9H1F0 79 aa4.71□□□□□ -1.65
USF3-204ENST00000496826 CARHSP1Q9Y2V2 147 aaKnown RBP4.71□□□□□ -1.65
USF3-204ENST00000496826 C9orf62Q8N4C0 152 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 TP53TG1Q9Y2A0 90 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 FAM236AA0A1B0GUQ0 79 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 FAM236BA0A1B0GV22 79 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 E9PLN8 166 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 TMEM14EPQ6UXP3 125 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 IGF2BP2-AS1Q96M15 143 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 KCNE3Q9Y6H6 103 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 EML6Q6ZMW3 1958 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 ZG16O60844 167 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 CRYGBP07316 175 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 MLST8Q9BVC4 326 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 C17orf100A8MU93 164 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 FAM19A2Q8N3H0 131 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 TMEM263Q8WUH6 116 aaKnown RBP4.71□□□□□ -1.66
USF3-204ENST00000496826 FGF22Q9HCT0 170 aa4.71□□□□□ -1.66
USF3-204ENST00000496826 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.71□□□□□ -1.66
USF3-204ENST00000496826 J3QQQ9 107 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms