RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 NABP2Q9BQ15 211 aa4.39□□□□□ -1.71
CACNA1C-229ENST00000496818 TMEM208Q9BTX3 173 aa4.39□□□□□ -1.71
CACNA1C-229ENST00000496818 VAMP8Q9BV40 100 aa4.39□□□□□ -1.71
CACNA1C-229ENST00000496818 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
CACNA1C-229ENST00000496818 NBEAL2Q6ZNJ1 2754 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 ZFP92A6NM28 416 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 C9JCJ5 164 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 FNDC10F2Z333 226 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 H3BUA1 57 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 K7EP13 123 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 RBFOX2O43251 390 aaKnown RBP eCLIP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 YPEL1O60688 119 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 HPRT1P00492 218 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 CA2P00918 260 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 IGLV1-51P01701 117 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 TRGV3P03979 118 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 OR10J4P0C629 311 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 RD3LP0DJH9 198 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 ZNF25P17030 456 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 CNTFRP26992 372 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 MC5RP33032 325 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 KIR2DS2P43631 304 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 CEBPGP53567 150 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 BRWD1-AS2P59051 145 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 CX3CL1P78423 397 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 GFI1BQ5VTD9 330 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 SSX7Q7RTT5 188 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 H2BFWTQ7Z2G1 175 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 PPP1R27Q86WC6 154 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 OR9G4Q8NGQ1 327 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 OR52E5Q8NH55 327 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 YPEL2Q96QA6 119 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 FAM103A1Q9BTL3 118 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 IFI27L2Q9H2X8 130 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 PARLQ9H300 379 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 PRO1933Q9H354 126 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 FBXL15Q9H469 300 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 VSIRQ9H7M9 311 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 ZNF355PQ9NSJ1 428 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 UQCR10Q9UDW1 63 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 WASHC3Q9Y3C0 194 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 MRPS16Q9Y3D3 137 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
CACNA1C-229ENST00000496818 C15orf62A8K5M9 175 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 SLC25A17O43808 307 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 APOA2P02652 100 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 OR5G3P0C626 314 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 RPEL1Q2QD12 228 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 OR8G2PQ6IF36 304 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 RPP25LQ8N5L8 163 aaKnown RBP4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 SLC24A4Q8NFF2 622 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 OR10G9Q8NGN4 311 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 OR10G7Q8NGN6 311 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 C11orf52Q96A22 123 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 SLC35E1Q96K37 410 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 RNF5Q99942 180 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 CHRDL1Q9BU40 450 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 NPCDR1Q9BY65 106 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 AAMDCQ9H7C9 122 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 MRPL27Q9P0M9 148 aaKnown RBP4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 PEMTQ9UBM1 199 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 FUT9Q9Y231 359 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 WDR83OSQ9Y284 106 aa4.37□□□□□ -1.71
CACNA1C-229ENST00000496818 DNAH9Q9NYC9 4486 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 H0YJW9 148 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 PROP1O75360 226 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 CNIH1O95406 144 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 TOMM40O96008 361 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 HLA-DQA1P01909 254 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 PPBPP02775 128 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 AREGP15514 252 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 DUTP33316 252 aaKnown RBP4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 CDKN1BP46527 198 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 LGALS7P47929 136 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 CDC34P49427 236 aaPredicted RBP4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 FGF8P55075 233 aaPredicted RBP4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 SYNJ2BPP57105 145 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 ERVK-16P61578 105 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 RPL39P5Q59GN2 51 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 PDZD11Q5EBL8 140 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 PSMG4Q5JS54 123 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 FFAR4Q5NUL3 377 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 LEMD1Q68G75 181 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 ZNF562Q6V9R5 426 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 LINC01551Q86U37 167 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 PDPNQ86YL7 162 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 OR5T1Q8NG75 326 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 OR2K2Q8NGT1 345 aa4.36□□□□□ -1.71
CACNA1C-229ENST00000496818 DYNLRB2Q8TF09 96 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms