RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 BPIFA4PQ86YQ2 179 aa9.05□□□□□ -0.96
USF1-207ENST00000496363 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
USF1-207ENST00000496363 MITD1Q8WV92 249 aa9.05□□□□□ -0.96
USF1-207ENST00000496363 ZNF701M0R085 212 aaPredicted RBP9.04□□□□□ -0.96
USF1-207ENST00000496363 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 C10orf113Q5VZT2 155 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 GNPNAT1Q96EK6 184 aaPredicted RBP9.04□□□□□ -0.96
USF1-207ENST00000496363 C20orf144Q9BQM9 153 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 Q9H8V8 135 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 RNF24Q9Y225 148 aa9.04□□□□□ -0.96
USF1-207ENST00000496363 TRAV12-3A0A0B4J271 114 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 M6PRP20645 277 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 CAMLGP49069 296 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 MIC13Q5XKP0 118 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 CCDC28AQ8IWP9 274 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 MAPKAPK5-AS1Q8N8E1 139 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 SAT2Q96F10 170 aaPredicted RBP9.03□□□□□ -0.96
USF1-207ENST00000496363 LSM5Q9Y4Y9 91 aaKnown RBP9.03□□□□□ -0.96
USF1-207ENST00000496363 PXMP4Q9Y6I8 212 aa9.03□□□□□ -0.96
USF1-207ENST00000496363 CENPXA8MT69 81 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 FAM25EA8MYX2 175 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 SNURFLB1AK76 121 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 L7N2F9 121 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 CST7O76096 145 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 RLN2P04090 185 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 IL7P13232 177 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 BCAP31P51572 246 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 VAMP2P63027 116 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 ESRGQ1W209 222 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 NRARPQ7Z6K4 114 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 C20orf85Q9H1P6 137 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 TMPRSS5Q9H3S3 457 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 DNAJC4Q9NNZ3 241 aa9.02□□□□□ -0.97
USF1-207ENST00000496363 FAM24AA6NFZ4 105 aa9.01□□□□□ -0.97
USF1-207ENST00000496363 NPIPB6E9PJ23 425 aa9.01□□□□□ -0.97
USF1-207ENST00000496363 LEPP41159 167 aa9.01□□□□□ -0.97
USF1-207ENST00000496363 Q6ZTI0 123 aa9.01□□□□□ -0.97
USF1-207ENST00000496363 ZNF431Q8TF32 576 aaPredicted RBP9.01□□□□□ -0.97
USF1-207ENST00000496363 C11orf1Q9H5F2 150 aa9.01□□□□□ -0.97
USF1-207ENST00000496363 ZNF586Q9NXT0 402 aa9.01□□□□□ -0.97
USF1-207ENST00000496363 FAT1Q14517 4588 aa9□□□□□ -0.97
USF1-207ENST00000496363 M0R3E3 92 aa9□□□□□ -0.97
USF1-207ENST00000496363 CAV2P51636 162 aa9□□□□□ -0.97
USF1-207ENST00000496363 KRTAP10-2P60368 255 aa9□□□□□ -0.97
USF1-207ENST00000496363 ERCC8Q13216 396 aa9□□□□□ -0.97
USF1-207ENST00000496363 ZNF846Q147U1 533 aa9□□□□□ -0.97
USF1-207ENST00000496363 Q6ZRG5 221 aa9□□□□□ -0.97
USF1-207ENST00000496363 ZNF503Q96F45 646 aa9□□□□□ -0.97
USF1-207ENST00000496363 ODF3Q96PU9 254 aa9□□□□□ -0.97
USF1-207ENST00000496363 SEC22CQ9BRL7 303 aa9□□□□□ -0.97
USF1-207ENST00000496363 UPK3BQ9BT76 320 aa9□□□□□ -0.97
USF1-207ENST00000496363 Q9H3A6 140 aa9□□□□□ -0.97
USF1-207ENST00000496363 UQCC1Q9NVA1 299 aa9□□□□□ -0.97
USF1-207ENST00000496363 WDR83OSQ9Y284 106 aa9□□□□□ -0.97
USF1-207ENST00000496363 TRAV6A0A075B6T7 132 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 UBE2L5PA0A1B0GUS4 154 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 PLA2G10O15496 165 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 RAB31Q13636 194 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 OR1L4Q8NGR5 311 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 PYGO2Q9BRQ0 406 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 GSN-AS1Q9NRJ2 163 aa8.99□□□□□ -0.97
USF1-207ENST00000496363 MRPS16Q9Y3D3 137 aaKnown RBP8.99□□□□□ -0.97
USF1-207ENST00000496363 IGSF23A1L1A6 192 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 C5orf51A6NDU8 294 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 BAXQ07812 192 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 CD300CQ08708 224 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 DAZ2Q13117 558 aaKnown RBP8.98□□□□□ -0.97
USF1-207ENST00000496363 BTN1A1Q13410 526 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 GUK1Q16774 197 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 VWC2Q2TAL6 325 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 C11orf72Q8NBR9 251 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 PFDN5Q99471 154 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 SLC39A9Q9NUM3 307 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 HERC1Q15751 4861 aa8.98□□□□□ -0.97
USF1-207ENST00000496363 TRBV19A0A075B6N1 114 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 A0A096LPF7 62 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 C7orf71A4D174 169 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 H3BNG1 76 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 LYRM1O43325 122 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 NDUFB4O95168 129 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 PYYP10082 97 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 S100A10P60903 97 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 CNPY1Q3B7I2 92 aa8.97□□□□□ -0.97
USF1-207ENST00000496363 TRGV2A0A075B6R0 118 aa8.96□□□□□ -0.98
USF1-207ENST00000496363 TRGV1A0A0A0MS02 117 aa8.96□□□□□ -0.98
USF1-207ENST00000496363 KLLNB2CW77 178 aa8.96□□□□□ -0.98
USF1-207ENST00000496363 ZNF253O75346 499 aa8.96□□□□□ -0.98
USF1-207ENST00000496363 TCRBP04435 133 aa8.96□□□□□ -0.98
USF1-207ENST00000496363 SLC25A5P05141 298 aaKnown RBP8.96□□□□□ -0.98
USF1-207ENST00000496363 FGF7P21781 194 aa8.96□□□□□ -0.98
USF1-207ENST00000496363 RNASE4P34096 147 aaKnown RBP8.96□□□□□ -0.98
USF1-207ENST00000496363 RPL29P47914 159 aaKnown RBP8.96□□□□□ -0.98
USF1-207ENST00000496363 SULT1A1P50225 295 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms