RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ATP5G3P48201 142 aa16.22■□□□□ 0.19
ECHDC3-205ENST00000496136 DEFB131AP59861 70 aa16.22■□□□□ 0.19
ECHDC3-205ENST00000496136 PRELID1Q9Y255 219 aa16.22■□□□□ 0.19
ECHDC3-205ENST00000496136 FAM210AQ96ND0 272 aa16.21■□□□□ 0.19
ECHDC3-205ENST00000496136 C19orf73Q9NVV2 129 aa16.21■□□□□ 0.19
ECHDC3-205ENST00000496136 NBEAL1Q6ZS30 2694 aa16.21■□□□□ 0.19
ECHDC3-205ENST00000496136 AGRNO00468 2067 aa16.21■□□□□ 0.19
ECHDC3-205ENST00000496136 C11orf94C9JXX5 98 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 CMC4P56277 68 aaPredicted RBP16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 DEFB1P60022 68 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 CD81P60033 236 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 ZNF738Q8NE65 137 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 CMTM2Q8TAZ6 248 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 RPUSD4Q96CM3 377 aaKnown RBP16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 MRPL53Q96EL3 112 aaKnown RBP16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 FAM110AQ9BQ89 295 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 ZMAT5Q9UDW3 170 aaKnown RBP16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 VAX2Q9UIW0 290 aa16.21■□□□□ 0.18
ECHDC3-205ENST00000496136 LOC102723971A0A1B0GUV8 181 aa16.2■□□□□ 0.18
ECHDC3-205ENST00000496136 SLC25A5P05141 298 aaKnown RBP16.2■□□□□ 0.18
ECHDC3-205ENST00000496136 TAGLN2P37802 199 aaKnown RBP16.2■□□□□ 0.18
ECHDC3-205ENST00000496136 GTSCR1Q86UQ5 136 aa16.2■□□□□ 0.18
ECHDC3-205ENST00000496136 C5orf17Q8NAS9 161 aa16.2■□□□□ 0.18
ECHDC3-205ENST00000496136 RXFP4Q8TDU9 374 aa16.2■□□□□ 0.18
ECHDC3-205ENST00000496136 OR11H12B2RN74 326 aa16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 PRAC2D3DTV9 90 aa16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 MEF2BQ02080 365 aaPredicted RBP16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 APRG1Q8IVJ8 170 aa16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 TXNDC17Q9BRA2 123 aa16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 EIF5A2Q9GZV4 153 aaKnown RBP16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 EPDR1Q9UM22 224 aa16.19■□□□□ 0.18
ECHDC3-205ENST00000496136 CSN1S1P47710 185 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 GNG5P63218 68 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 ZNF124Q15973 351 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 TOR2AQ5JU69 321 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 PRR25Q96S07 402 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 F6UB75 175 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 ZNF506Q5JVG8 444 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 Q8N1Y9 231 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 ARL6IP6Q8N6S5 226 aa16.18■□□□□ 0.18
ECHDC3-205ENST00000496136 DIRC3C9JPN6 131 aa16.17■□□□□ 0.18
ECHDC3-205ENST00000496136 WFDC10AQ9H1F0 79 aa16.17■□□□□ 0.18
ECHDC3-205ENST00000496136 RPH3ALQ9UNE2 315 aa16.17■□□□□ 0.18
ECHDC3-205ENST00000496136 TCRAP04437 139 aa16.16■□□□□ 0.18
ECHDC3-205ENST00000496136 ZNF705DP0CH99 300 aaPredicted RBP16.16■□□□□ 0.18
ECHDC3-205ENST00000496136 ZNF705BP0CI00 300 aaPredicted RBP16.16■□□□□ 0.18
ECHDC3-205ENST00000496136 GDF5OSQ5U4N7 250 aa16.16■□□□□ 0.18
ECHDC3-205ENST00000496136 SRSF3P84103 164 aaKnown RBP16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 SAV1Q9H4B6 383 aaPredicted RBP16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 KPRPQ5T749 579 aaPredicted RBP16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 FOXI2Q6ZQN5 318 aa16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 OR8A1Q8NGG7 326 aa16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 HIST1H2BAQ96A08 127 aa16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 TCEAL7Q9BRU2 100 aa16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 MED9Q9NWA0 146 aa16.15■□□□□ 0.18
ECHDC3-205ENST00000496136 IGKV2-40A0A087WW87 121 aaPredicted RBP16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 A0A0J9YX75 114 aa16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 KNCNA6PVL3 124 aa16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 IGKV2D-40P01614 121 aaPredicted RBP16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 EBLN2Q6P2I7 272 aa16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 GOLT1AQ6ZVE7 132 aa16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 ATG101Q9BSB4 218 aa16.14■□□□□ 0.17
ECHDC3-205ENST00000496136 LINC00862A6NCI5 91 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 F6UZH7 168 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 PDE6DO43924 150 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 ACTL10Q5JWF8 245 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 DEFB125Q8N687 156 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 CITED4Q96RK1 184 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 SCO2A0A1W2PP80 73 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 RAB19A4D1S5 217 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 PEX7O00628 323 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 LINC00479Q96M42 142 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 VGLL1Q99990 258 aa16.13■□□□□ 0.17
ECHDC3-205ENST00000496136 RBAKDNA6NC62 111 aa16.12■□□□□ 0.17
ECHDC3-205ENST00000496136 PEA15Q15121 130 aa16.12■□□□□ 0.17
ECHDC3-205ENST00000496136 CYB561D1Q8N8Q1 229 aa16.12■□□□□ 0.17
ECHDC3-205ENST00000496136 OR10J6PQ8NGY7 276 aa16.12■□□□□ 0.17
ECHDC3-205ENST00000496136 H3BMM0 161 aa16.11■□□□□ 0.17
ECHDC3-205ENST00000496136 HIST1H1AQ02539 215 aaPredicted RBP16.11■□□□□ 0.17
ECHDC3-205ENST00000496136 ERCC8Q13216 396 aa16.11■□□□□ 0.17
ECHDC3-205ENST00000496136 AGPAT4-IT1Q9H0P7 198 aa16.11■□□□□ 0.17
ECHDC3-205ENST00000496136 SERTM2A0A1B0GWG4 89 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 C9JQL5 133 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 HLA-DRB4P13762 266 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 CNN1P51911 297 aaKnown RBP16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 C9orf47Q6ZRZ4 202 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 C2CD4CQ8TF44 421 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 C11orf52Q96A22 123 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 SGK494Q96LW2 274 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 SMDT1Q9H4I9 107 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 HLA-DRB4X5D2U9 266 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 TRAV8-1A0A0A6YYK1 113 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 K7EQM0 130 aa16.1■□□□□ 0.17
ECHDC3-205ENST00000496136 TRAV34A0A0B4J273 112 aa16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 NPIPB6E9PJ23 425 aa16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 TMEM250H0YL14 139 aa16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 IGLV2-11P01706 119 aa16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 SRP19P09132 144 aaKnown RBP16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 OR4B1Q8NGF8 309 aa16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 LINC00477Q96M19 166 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms