RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 ZNF25P17030 456 aaPredicted RBP1.33□□□□□ -2.2
CLTC-208ENST00000496076 TEN1Q86WV5 123 aa1.33□□□□□ -2.2
CLTC-208ENST00000496076 BRK1Q8WUW1 75 aa1.33□□□□□ -2.2
CLTC-208ENST00000496076 LINC00052Q96N35 136 aa1.33□□□□□ -2.2
CLTC-208ENST00000496076 BATF3Q9NR55 127 aa1.33□□□□□ -2.2
CLTC-208ENST00000496076 SDK1Q7Z5N4 2213 aa1.33□□□□□ -2.2
CLTC-208ENST00000496076 ZCCHC11Q5TAX3 1644 aaKnown RBP1.33□□□□□ -2.2
CLTC-208ENST00000496076 CEP192Q8TEP8 1941 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 LAMB4A4D0S4 1761 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 LAMB2P55268 1798 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 LOC107984640A0A0U1RRK4 108 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 TRBV6-4A0A1B0GX49 114 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 H3BMG7 143 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 CCL25O15444 150 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 MRPS36P82909 103 aaKnown RBP1.32□□□□□ -2.2
CLTC-208ENST00000496076 MPV17LQ2QL34 196 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 TMEM229BQ8NBD8 167 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 ZNF431Q8TF32 576 aaPredicted RBP1.32□□□□□ -2.2
CLTC-208ENST00000496076 DIRC1Q969H9 104 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 MCEEQ96PE7 176 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 OR4C12Q96R67 309 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 AIF1LQ9BQI0 150 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 CBLN4Q9NTU7 201 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 FKBP11Q9NYL4 201 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 TRPM1Q7Z4N2 1603 aa1.32□□□□□ -2.2
CLTC-208ENST00000496076 KDM6AO15550 1401 aaPredicted RBP1.32□□□□□ -2.2
CLTC-208ENST00000496076 A0A087WSZ3 146 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 KLF7O75840 302 aaPredicted RBP1.31□□□□□ -2.2
CLTC-208ENST00000496076 MAXP61244 160 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 OR8B8Q15620 311 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 OR5AS1Q8N127 324 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 CLEC2BQ92478 149 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 ARFGEF3Q5TH69 2177 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 ALPK2Q86TB3 2170 aa1.31□□□□□ -2.2
CLTC-208ENST00000496076 NISCHQ9Y2I1 1504 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 INTS1Q8N201 2190 aaKnown RBP1.3□□□□□ -2.2
CLTC-208ENST00000496076 A0A096LPI6 279 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 TRBV27A0A0K0K1C4 114 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 H3BRM9 83 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 DEGS1O15121 323 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 TPT1P13693 172 aaKnown RBP1.3□□□□□ -2.2
CLTC-208ENST00000496076 CRYGSP22914 178 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 SDC4P31431 198 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 DIAPH2-AS1Q14236 149 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 OR8I2Q8N0Y5 310 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 TMEM138Q9NPI0 162 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 NUP210Q8TEM1 1887 aaPredicted RBP1.3□□□□□ -2.2
CLTC-208ENST00000496076 A2MP01023 1474 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 DLC1Q96QB1 1528 aa1.3□□□□□ -2.2
CLTC-208ENST00000496076 SCN3AQ9NY46 2000 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 TRAV36DV7A0A075B6V5 113 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 TRBV7-6A0A0J9YX20 115 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 LOC105371267A0A1B0GV96 52 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 INE1O15225 51 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 COX7CP15954 63 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 CMPK1P30085 196 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 FOXA3P55318 350 aaPredicted RBP1.29□□□□□ -2.2
CLTC-208ENST00000496076 GDF5OSQ5U4N7 250 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 KRTAP26-1Q6PEX3 210 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 OR5AK2Q8NH90 309 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 ODF3Q96PU9 254 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 TMEM14CQ9P0S9 112 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 TCOF1Q13428 1488 aaKnown RBP1.29□□□□□ -2.2
CLTC-208ENST00000496076 ANKRD31Q8N7Z5 1873 aa1.29□□□□□ -2.2
CLTC-208ENST00000496076 LOC107984156A0A0G2JMH3 177 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 C3orf85A0A1B0GTC6 90 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 M0R2N4 97 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 ANGP03950 147 aaKnown RBP1.28□□□□□ -2.2
CLTC-208ENST00000496076 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 ARL17AQ8IVW1 177 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 MORN4Q8NDC4 146 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 OR51A4Q8NGJ6 313 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 CCL4L1Q8NHW4 92 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 CST11Q9H112 138 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 OVOS2A0A0G2JMS6 1433 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 KIAA1107Q9UPP5 1409 aa1.28□□□□□ -2.2
CLTC-208ENST00000496076 TNRC6BQ9UPQ9 1833 aaKnown RBP1.28□□□□□ -2.2
CLTC-208ENST00000496076 MED13Q9UHV7 2174 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 COL24A1Q17RW2 1714 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 CECR2Q9BXF3 1484 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 FAM135BQ49AJ0 1406 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.27□□□□□ -2.21
CLTC-208ENST00000496076 ARPC5O15511 151 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 NUPR1O60356 82 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 DPM2O94777 84 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 PPYP01298 95 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 TRACP01848 142 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 MT-ND4LP03901 98 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 SCGB1A1P11684 91 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
CLTC-208ENST00000496076 ALX1Q15699 326 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 CCDC153Q494R4 210 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 LINC00322Q6ZN03 302 aaPredicted RBP1.27□□□□□ -2.21
CLTC-208ENST00000496076 FOXI2Q6ZQN5 318 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 ZCCHC23Q6ZST2 131 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 FAM19A2Q8N3H0 131 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 MRPL57Q9BQC6 102 aaKnown RBP1.27□□□□□ -2.21
CLTC-208ENST00000496076 JPT1Q9UK76 154 aa1.27□□□□□ -2.21
CLTC-208ENST00000496076 DIDO1Q9BTC0 2240 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms