RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MORN2Q502X0 79 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 SPATA12Q7Z6I5 190 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 TET1Q8NFU7 2136 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 OR2T27Q8NH04 317 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 RNASE6Q93091 150 aaKnown RBP2.52□□□□□ -2.01
CCDC39-207ENST00000495817 ARL11Q969Q4 196 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 ERMAPQ96PL5 475 aaPredicted RBP2.52□□□□□ -2.01
CCDC39-207ENST00000495817 LINC00470Q9BZP3 86 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 FAIMQ9NVQ4 179 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 TRAPPC2LQ9UL33 140 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 TNFSF18Q9UNG2 199 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 CYSLTR1Q9Y271 337 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 FAM215AQ9Y5M1 114 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 PLIN4Q96Q06 1357 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 ZFHX2Q9C0A1 2572 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-207ENST00000495817 MYH8P13535 1937 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 DUXBA0A1W2PPF3 345 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 OR4C45A6NMZ5 311 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 F6UZH7 168 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 H7BYZ3 331 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 PGLYRP1O75594 196 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-207ENST00000495817 NPYP01303 97 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 C8GP07360 202 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 G6PCP35575 357 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 NCS1P62166 190 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 SLC38A11Q08AI6 406 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 TNFAIP8L3Q5GJ75 292 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 HAGHLQ6PII5 290 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-207ENST00000495817 GPHB5Q86YW7 130 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 GNPNAT1Q96EK6 184 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-207ENST00000495817 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 TP53RKQ96S44 253 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 CXCL16Q9H2A7 254 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 CXorf21Q9HAI6 301 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 GPR84Q9NQS5 396 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 LAMTOR2Q9Y2Q5 125 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 NCOR2Q9Y618 2525 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 FRYQ5TBA9 3013 aa2.51□□□□□ -2.01
CCDC39-207ENST00000495817 A0A0J9YY10 115 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 A0A1B0GX78 115 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 C11orf86A6NJI1 115 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 RIIAD1A6NNX1 92 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 FABP5P3A8MUU1 101 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 LOC730098B7Z3J9 87 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 C9JAW5 83 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 PIRO00625 290 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 OR2H2O95918 312 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 DBIP07108 87 aaKnown RBP2.5□□□□□ -2.01
CCDC39-207ENST00000495817 TSPAN19P0C672 248 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 SMIM17P0DL12 118 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 S100A11P31949 105 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 ZNF140P52738 457 aaPredicted RBP2.5□□□□□ -2.01
CCDC39-207ENST00000495817 RPS28P62857 69 aaKnown RBP2.5□□□□□ -2.01
CCDC39-207ENST00000495817 CCSMST1Q4G0I0 132 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 Q5XG85 94 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 SNX29P2Q8IUI4 249 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 SLC25A40Q8TBP6 338 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 CARD19Q96LW7 228 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 Q9BRP9 147 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 HIGD1AQ9Y241 93 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 MED31Q9Y3C7 131 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 WDR87Q6ZQQ6 2873 aa2.5□□□□□ -2.01
CCDC39-207ENST00000495817 LOC400499M0QZD8 3231 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 MICAL3Q7RTP6 2002 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 GVINP1Q7Z2Y8 2422 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 ZDBF2Q9HCK1 2354 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 SPTBN4Q9H254 2564 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 EPG5Q9HCE0 2579 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 TCHHQ07283 1943 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 COX7A2LO14548 114 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 FAM107AO95990 144 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 UCHL1P09936 223 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 ZNF728P0DKX0 622 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 RPS4Y1P22090 263 aaKnown RBP2.49□□□□□ -2.01
CCDC39-207ENST00000495817 CMPK1P30085 196 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 GLYATL3Q5SZD4 288 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 OR8I2Q8N0Y5 310 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 C12orf45Q8N5I9 185 aaPredicted RBP2.49□□□□□ -2.01
CCDC39-207ENST00000495817 TMEM229BQ8NBD8 167 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 RAB2BQ8WUD1 216 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 SLC7A6Q92536 515 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 FGF13Q92913 245 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 MALSU1Q96EH3 234 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 ADAT3Q96EY9 351 aaPredicted RBP2.49□□□□□ -2.01
CCDC39-207ENST00000495817 PPP3R2Q96LZ3 170 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 TMEM70Q9BUB7 260 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 PDCD10Q9BUL8 212 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 OR2H1Q9GZK4 316 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 PBOV1Q9GZY1 135 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 C11orf68Q9H3H3 251 aaKnown RBP2.49□□□□□ -2.01
CCDC39-207ENST00000495817 SPANXCQ9NY87 97 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 HS3ST2Q9Y278 367 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 AMMECR1Q9Y4X0 333 aaPredicted RBP2.49□□□□□ -2.01
CCDC39-207ENST00000495817 USP24Q9UPU5 2620 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 ZZEF1O43149 2961 aa2.49□□□□□ -2.01
CCDC39-207ENST00000495817 SMG1Q96Q15 3661 aaKnown RBP2.48□□□□□ -2.01
CCDC39-207ENST00000495817 MYH4Q9Y623 1939 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 CACNA1HO95180 2353 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms