RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 EMP1P54849 157 aa12.31□□□□□ -0.44
CTNS-207ENST00000495445 RHOBP62745 196 aa12.31□□□□□ -0.44
CTNS-207ENST00000495445 FAM222AQ5U5X8 452 aa12.31□□□□□ -0.44
CTNS-207ENST00000495445 BAP18Q8IXM2 172 aa12.31□□□□□ -0.44
CTNS-207ENST00000495445 THAP6Q8TBB0 222 aa12.31□□□□□ -0.44
CTNS-207ENST00000495445 BIRC6Q9NR09 4857 aa12.31□□□□□ -0.44
CTNS-207ENST00000495445 TRAV12-2A0A075B6T6 113 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 NDUFB4O95168 129 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
CTNS-207ENST00000495445 CLINT1Q14677 625 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 NIPSNAP3BQ9BS92 247 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 TMEM208Q9BTX3 173 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
CTNS-207ENST00000495445 YTHDF2Q9Y5A9 579 aaKnown RBP12.3□□□□□ -0.44
CTNS-207ENST00000495445 DNAH17Q9UFH2 4485 aa12.29□□□□□ -0.44
CTNS-207ENST00000495445 ZNF705GA8MUZ8 300 aaPredicted RBP12.29□□□□□ -0.44
CTNS-207ENST00000495445 AZU1P20160 251 aa12.29□□□□□ -0.44
CTNS-207ENST00000495445 CDKN1BP46527 198 aa12.29□□□□□ -0.44
CTNS-207ENST00000495445 PDE6HQ13956 83 aa12.29□□□□□ -0.44
CTNS-207ENST00000495445 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
CTNS-207ENST00000495445 RPP25LQ8N5L8 163 aaKnown RBP12.29□□□□□ -0.44
CTNS-207ENST00000495445 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
CTNS-207ENST00000495445 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
CTNS-207ENST00000495445 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 PTTG1O95997 202 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 PET100P0DJ07 73 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 RPL12P30050 165 aaKnown RBP12.28□□□□□ -0.44
CTNS-207ENST00000495445 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 ATP5SQ99766 215 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 PPP1R14DQ9NXH3 145 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 ALG5Q9Y673 324 aa12.28□□□□□ -0.44
CTNS-207ENST00000495445 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 CT45A10P0DMU9 189 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 PYYP10082 97 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 TAS2R60P59551 318 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 KIR3DS1Q14943 382 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 MIR17HGQ75NE6 70 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 FAM210BQ96KR6 192 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 ODF3Q96PU9 254 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 LINC01587Q99440 93 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 MBD2Q9UBB5 411 aa12.27□□□□□ -0.45
CTNS-207ENST00000495445 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
CTNS-207ENST00000495445 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
CTNS-207ENST00000495445 KCNIP2Q9NS61 270 aa12.26□□□□□ -0.45
CTNS-207ENST00000495445 PRELID1Q9Y255 219 aa12.26□□□□□ -0.45
CTNS-207ENST00000495445 C17orf112F2Z3M2 114 aa12.25□□□□□ -0.45
CTNS-207ENST00000495445 M0R3E3 92 aa12.25□□□□□ -0.45
CTNS-207ENST00000495445 NDUFAF3Q9BU61 184 aa12.25□□□□□ -0.45
CTNS-207ENST00000495445 MRPL32Q9BYC8 188 aaKnown RBP12.25□□□□□ -0.45
CTNS-207ENST00000495445 WFDC1Q9HC57 220 aa12.25□□□□□ -0.45
CTNS-207ENST00000495445 H7BYZ3 331 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 FXYD5Q96DB9 178 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 FAM19A4Q96LR4 140 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 OR51M1Q9H341 326 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 FAT2Q9NYQ8 4349 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 FUT9Q9Y231 359 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 TIMM9Q9Y5J7 89 aa12.24□□□□□ -0.45
CTNS-207ENST00000495445 DAD1P61803 113 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 ZNF493Q6ZR52 646 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 EXOC3-AS1Q8N2X6 119 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 BLNKQ8WV28 456 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 RNF141Q8WVD5 230 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 LINC00477Q96M19 166 aa12.23□□□□□ -0.45
CTNS-207ENST00000495445 IFNA5P01569 189 aa12.22□□□□□ -0.45
CTNS-207ENST00000495445 C9orf47Q6ZRZ4 202 aa12.22□□□□□ -0.45
CTNS-207ENST00000495445 RNASE8Q8TDE3 154 aaKnown RBP12.22□□□□□ -0.45
CTNS-207ENST00000495445 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
CTNS-207ENST00000495445 PAXXQ9BUH6 204 aa12.22□□□□□ -0.45
CTNS-207ENST00000495445 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
CTNS-207ENST00000495445 AGPAT4-IT1Q9H0P7 198 aa12.22□□□□□ -0.45
CTNS-207ENST00000495445 LEPP41159 167 aa12.21□□□□□ -0.45
CTNS-207ENST00000495445 ERCC8Q13216 396 aa12.21□□□□□ -0.45
CTNS-207ENST00000495445 FCN2Q15485 313 aa12.21□□□□□ -0.45
CTNS-207ENST00000495445 FFAR4Q5NUL3 377 aa12.21□□□□□ -0.45
CTNS-207ENST00000495445 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
CTNS-207ENST00000495445 HECTD4Q9Y4D8 3996 aa12.21□□□□□ -0.46
CTNS-207ENST00000495445 KLLNB2CW77 178 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 SLC25A5P05141 298 aaKnown RBP12.2□□□□□ -0.46
CTNS-207ENST00000495445 P0DMU3 169 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 ICAM4Q14773 271 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 POM121L12Q8N7R1 296 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
CTNS-207ENST00000495445 MED28Q9H204 178 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 AAMDCQ9H7C9 122 aa12.2□□□□□ -0.46
CTNS-207ENST00000495445 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
CTNS-207ENST00000495445 CBY3A6NI87 242 aa12.19□□□□□ -0.46
CTNS-207ENST00000495445 ZNF324O75467 553 aaPredicted RBP12.19□□□□□ -0.46
CTNS-207ENST00000495445 NMBP08949 121 aa12.19□□□□□ -0.46
CTNS-207ENST00000495445 HTN1P15515 57 aa12.19□□□□□ -0.46
CTNS-207ENST00000495445 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
CTNS-207ENST00000495445 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
CTNS-207ENST00000495445 OR10J4P0C629 311 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms