RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 KCNRGQ8N5I3 272 aa11.8□□□□□ -0.52
YIF1A-209ENST00000494836 OR10J6PQ8NGY7 276 aa11.8□□□□□ -0.52
YIF1A-209ENST00000494836 MRPL53Q96EL3 112 aaKnown RBP11.8□□□□□ -0.52
YIF1A-209ENST00000494836 ZNF503Q96F45 646 aa11.8□□□□□ -0.52
YIF1A-209ENST00000494836 PPP1R14DQ9NXH3 145 aa11.8□□□□□ -0.52
YIF1A-209ENST00000494836 PRELID1Q9Y255 219 aa11.8□□□□□ -0.52
YIF1A-209ENST00000494836 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 M0R3E3 92 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 EIF3GO75821 320 aaKnown RBP eCLIP11.79□□□□□ -0.52
YIF1A-209ENST00000494836 AMBPP02760 352 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 CDC34P49427 236 aaPredicted RBP11.79□□□□□ -0.52
YIF1A-209ENST00000494836 PQLC2Q6ZP29 291 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 PHYHIPLQ96FC7 376 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 ST6GAL2Q96JF0 529 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 ARPC5LQ9BPX5 153 aa11.79□□□□□ -0.52
YIF1A-209ENST00000494836 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
YIF1A-209ENST00000494836 hCG_2014768A0A024R1R8 64 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 A0A0D9SG52 128 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 MIFP14174 115 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 ICAM4Q14773 271 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 SPINK13Q1W4C9 94 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 RPP25LQ8N5L8 163 aaKnown RBP11.78□□□□□ -0.52
YIF1A-209ENST00000494836 CYTL1Q9NRR1 136 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 X6R8D5 127 aa11.78□□□□□ -0.52
YIF1A-209ENST00000494836 M0R2Z0 102 aa11.77□□□□□ -0.53
YIF1A-209ENST00000494836 HMGB3O15347 200 aaKnown RBP11.77□□□□□ -0.53
YIF1A-209ENST00000494836 ZNF705AQ6ZN79 300 aaPredicted RBP11.77□□□□□ -0.53
YIF1A-209ENST00000494836 TCTE3Q8IZS6 198 aa11.77□□□□□ -0.53
YIF1A-209ENST00000494836 Q8NAQ8 132 aa11.77□□□□□ -0.53
YIF1A-209ENST00000494836 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.53
YIF1A-209ENST00000494836 GOLT1BQ9Y3E0 138 aa11.77□□□□□ -0.53
YIF1A-209ENST00000494836 IGHV3OR16-12A0A075B7B8 117 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 IGHV4-28A0A0C4DH34 117 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 KANTRA0A1W2PQU2 76 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 DEFB4AO15263 64 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 INSP01308 110 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 RANP62826 216 aaKnown RBP11.76□□□□□ -0.53
YIF1A-209ENST00000494836 LYPD1Q8N2G4 141 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 RAB24Q969Q5 203 aa11.76□□□□□ -0.53
YIF1A-209ENST00000494836 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
YIF1A-209ENST00000494836 STARD9Q9P2P6 4700 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 CSMD3Q7Z407 3707 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 BCL2L11O43521 198 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 AKR1C8PQ5T2L2 129 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 CASC10Q5T4H9 136 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 ZFAND6Q6FIF0 208 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 AKAP14Q86UN6 197 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 BAP18Q8IXM2 172 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 Q9H3A6 140 aa11.75□□□□□ -0.53
YIF1A-209ENST00000494836 TRAV12-2A0A075B6T6 113 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 CRXO43186 299 aaPredicted RBP11.74□□□□□ -0.53
YIF1A-209ENST00000494836 PFDN1O60925 122 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 TSPOP30536 169 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 CDKN1BP46527 198 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 CSN1S1P47710 185 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 C1orf158Q8N1D5 194 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 NEU1Q99519 415 aa11.74□□□□□ -0.53
YIF1A-209ENST00000494836 ZNF471Q9BX82 626 aaPredicted RBP11.74□□□□□ -0.53
YIF1A-209ENST00000494836 SMIM9A6NGZ8 99 aa11.73□□□□□ -0.53
YIF1A-209ENST00000494836 RBMY1A1P0DJD3 496 aaKnown RBP11.73□□□□□ -0.53
YIF1A-209ENST00000494836 RBMY1CP0DJD4 496 aa11.73□□□□□ -0.53
YIF1A-209ENST00000494836 RBMY1FQ15415 496 aaKnown RBP11.73□□□□□ -0.53
YIF1A-209ENST00000494836 ODF3Q96PU9 254 aa11.73□□□□□ -0.53
YIF1A-209ENST00000494836 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
YIF1A-209ENST00000494836 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 CXorf1O96002 111 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
YIF1A-209ENST00000494836 HBE1P02100 147 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 C1QBP02746 253 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 CT45A10P0DMU9 189 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 GCHFRP30047 84 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 EIF5AP63241 154 aaKnown RBP11.72□□□□□ -0.53
YIF1A-209ENST00000494836 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
YIF1A-209ENST00000494836 CXorf65A6NEN9 183 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 LEPP41159 167 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 ERCC8Q13216 396 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 PMS2P11Q13670 270 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 SSX7Q7RTT5 188 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 CMTM2Q8TAZ6 248 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 HYLS1Q96M11 299 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 LINC00477Q96M19 166 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 TMEM167BQ9NRX6 74 aa11.71□□□□□ -0.53
YIF1A-209ENST00000494836 SEC11BP0C7V7 166 aa11.7□□□□□ -0.54
YIF1A-209ENST00000494836 ZNF726P1Q15940 193 aa11.7□□□□□ -0.54
YIF1A-209ENST00000494836 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms