RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
HDAC4-211ENST00000494800 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
HDAC4-211ENST00000494800 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
HDAC4-211ENST00000494800 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
HDAC4-211ENST00000494800 BAP18Q8IXM2 172 aa12.67□□□□□ -0.38
HDAC4-211ENST00000494800 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
HDAC4-211ENST00000494800 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
HDAC4-211ENST00000494800 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
HDAC4-211ENST00000494800 PRELID1Q9Y255 219 aa12.67□□□□□ -0.38
HDAC4-211ENST00000494800 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
HDAC4-211ENST00000494800 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
HDAC4-211ENST00000494800 CRXO43186 299 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-211ENST00000494800 RGS21Q2M5E4 152 aa12.66□□□□□ -0.38
HDAC4-211ENST00000494800 BLNKQ8WV28 456 aa12.66□□□□□ -0.38
HDAC4-211ENST00000494800 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
HDAC4-211ENST00000494800 PYYP10082 97 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 FFAR4Q5NUL3 377 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 ZNF767PQ75MW2 155 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 MIR17HGQ75NE6 70 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 RPP25LQ8N5L8 163 aaKnown RBP12.65□□□□□ -0.38
HDAC4-211ENST00000494800 LINC01587Q99440 93 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 SLC25A2Q9BXI2 301 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 PARD6GQ9BYG4 376 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-211ENST00000494800 OR51M1Q9H341 326 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
HDAC4-211ENST00000494800 YTHDF2Q9Y5A9 579 aaKnown RBP12.65□□□□□ -0.38
HDAC4-211ENST00000494800 LEPP41159 167 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 TAS2R45P59539 299 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 FCN2Q15485 313 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 FAM222AQ5U5X8 452 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 C20orf144Q9BQM9 153 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 PAXXQ9BUH6 204 aa12.64□□□□□ -0.39
HDAC4-211ENST00000494800 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
HDAC4-211ENST00000494800 OR7C2O60412 319 aa12.63□□□□□ -0.39
HDAC4-211ENST00000494800 NBEAP1P0C6P0 100 aa12.63□□□□□ -0.39
HDAC4-211ENST00000494800 PRB4P10163 310 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-211ENST00000494800 TAS2R60P59551 318 aa12.63□□□□□ -0.39
HDAC4-211ENST00000494800 ZNF266Q14584 549 aa12.63□□□□□ -0.39
HDAC4-211ENST00000494800 ODF3Q96PU9 254 aa12.63□□□□□ -0.39
HDAC4-211ENST00000494800 ALMS1Q8TCU4 4167 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 ZNF705GA8MUZ8 300 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-211ENST00000494800 NPIPB6E9PJ23 425 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 H7BYZ3 331 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 GIPP09681 153 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-211ENST00000494800 KHDC3LQ587J8 217 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 RNF141Q8WVD5 230 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
HDAC4-211ENST00000494800 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
HDAC4-211ENST00000494800 LYRM9A8MSI8 78 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 NDUFB4O95168 129 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 HTN1P15515 57 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 DAD1P61803 113 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 OXA1LQ15070 435 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 ACOT6Q3I5F7 207 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-211ENST00000494800 EXOC3-AS1Q8N2X6 119 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 INO80EQ8NBZ0 244 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-211ENST00000494800 C16orf74Q96GX8 76 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 APLNQ9ULZ1 77 aa12.61□□□□□ -0.39
HDAC4-211ENST00000494800 M0R3E3 92 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 OR10J4P0C629 311 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 UBE2L3P68036 154 aaKnown RBP12.6□□□□□ -0.39
HDAC4-211ENST00000494800 ICAM4Q14773 271 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 CCDC28AQ8IWP9 274 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 FXYD5Q96DB9 178 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 LINC00477Q96M19 166 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 AQP10Q96PS8 301 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 NDUFAF3Q9BU61 184 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 DNAH1Q9P2D7 4330 aa12.6□□□□□ -0.39
HDAC4-211ENST00000494800 A0A1W2PPV4 95 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 M6PRP20645 277 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 CSN1S1P47710 185 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 GFI1BQ5VTD9 330 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 ZNF493Q6ZR52 646 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 LYPD1Q8N2G4 141 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 FAM210BQ96KR6 192 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
HDAC4-211ENST00000494800 J3KRW8 73 aa12.57□□□□□ -0.4
HDAC4-211ENST00000494800 SLC25A5P05141 298 aaKnown RBP12.57□□□□□ -0.4
HDAC4-211ENST00000494800 HTN3P15516 51 aa12.57□□□□□ -0.4
HDAC4-211ENST00000494800 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
HDAC4-211ENST00000494800 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-211ENST00000494800 PRM2P04554 102 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 AZU1P20160 251 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 RANP62826 216 aaKnown RBP12.56□□□□□ -0.4
HDAC4-211ENST00000494800 ERCC8Q13216 396 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
HDAC4-211ENST00000494800 FXYD6-FXYD2A0A087WZ82 144 aa12.55□□□□□ -0.4
HDAC4-211ENST00000494800 TRAV12-3A0A0B4J271 114 aa12.55□□□□□ -0.4
HDAC4-211ENST00000494800 MBP02144 154 aa12.55□□□□□ -0.4
HDAC4-211ENST00000494800 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
HDAC4-211ENST00000494800 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms