RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 C15orf53Q8NAA6 179 aa10.3□□□□□ -0.76
ATG4B-223ENST00000493618 OR10J6PQ8NGY7 276 aa10.3□□□□□ -0.76
ATG4B-223ENST00000493618 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
ATG4B-223ENST00000493618 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
ATG4B-223ENST00000493618 GFI1BQ5VTD9 330 aa10.29□□□□□ -0.76
ATG4B-223ENST00000493618 OR1L4Q8NGR5 311 aa10.29□□□□□ -0.76
ATG4B-223ENST00000493618 SAT2Q96F10 170 aaPredicted RBP10.29□□□□□ -0.76
ATG4B-223ENST00000493618 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
ATG4B-223ENST00000493618 CCDC32Q9BV29 185 aa10.29□□□□□ -0.76
ATG4B-223ENST00000493618 LYRM2Q9NU23 88 aaPredicted RBP10.29□□□□□ -0.76
ATG4B-223ENST00000493618 ZNF586Q9NXT0 402 aa10.29□□□□□ -0.76
ATG4B-223ENST00000493618 PXMP4Q9Y6I8 212 aa10.29□□□□□ -0.76
ATG4B-223ENST00000493618 ATP5G1P05496 136 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 FGF7P21781 194 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 ATP5G3P48201 142 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 SULT1A1P50225 295 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 VWC2Q2TAL6 325 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 TMEM252Q8N6L7 170 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 GPN1Q9HCN4 374 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-223ENST00000493618 SLC39A9Q9NUM3 307 aa10.28□□□□□ -0.76
ATG4B-223ENST00000493618 TIMM8BQ9Y5J9 83 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-223ENST00000493618 TRAV12-3A0A0B4J271 114 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 CBY3A6NI87 242 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 H7BYZ3 331 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 CT45A10P0DMU9 189 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 S100A11P31949 105 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 IL15RAQ13261 267 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 STX12Q86Y82 276 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 RNASE8Q8TDE3 154 aaKnown RBP10.27□□□□□ -0.77
ATG4B-223ENST00000493618 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.77
ATG4B-223ENST00000493618 PFDN5Q99471 154 aa10.27□□□□□ -0.77
ATG4B-223ENST00000493618 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
ATG4B-223ENST00000493618 SIX6O95475 246 aa10.26□□□□□ -0.77
ATG4B-223ENST00000493618 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
ATG4B-223ENST00000493618 ERCC8Q13216 396 aa10.26□□□□□ -0.77
ATG4B-223ENST00000493618 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
ATG4B-223ENST00000493618 MZT2BQ6NZ67 158 aa10.26□□□□□ -0.77
ATG4B-223ENST00000493618 RNF141Q8WVD5 230 aa10.26□□□□□ -0.77
ATG4B-223ENST00000493618 NPIPB6E9PJ23 425 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 M0R3E3 92 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 PYYP10082 97 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 LEPP41159 167 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 HBG1P69891 147 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 HBG2P69892 147 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 GUK1Q16774 197 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 C1orf134Q5TEV5 83 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 CCDC28AQ8IWP9 274 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 BLNKQ8WV28 456 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
ATG4B-223ENST00000493618 GAGE12BA1L429 117 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 GAGE7O76087 117 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 GAGE12FP0CL80 117 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 GAGE12GP0CL81 117 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 GAGE12IP0CL82 117 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 NHLH2Q02577 135 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 ASAH1Q13510 395 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 OR5I1Q13606 314 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 THAP6Q8TBB0 222 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 TIMM9Q9Y5J7 89 aa10.24□□□□□ -0.77
ATG4B-223ENST00000493618 TRBV19A0A075B6N1 114 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 A0A0J9YY99 117 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 SNURFLB1AK76 121 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 NDUFB4O95168 129 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 ATP6V1FQ16864 119 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 LRRC37A5PQ49AS3 106 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 EXOC3-AS1Q8N2X6 119 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 ZNRF2Q8NHG8 242 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 ENKURQ8TC29 256 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 S100ZQ8WXG8 99 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 NPCDR1Q9BY65 106 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 OR5AC2Q9NZP5 309 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 LINC00588Q9Y4M8 146 aa10.23□□□□□ -0.77
ATG4B-223ENST00000493618 TRAV26-1A0A087WT03 109 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 RLN2P04090 185 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
ATG4B-223ENST00000493618 HOXA5P20719 270 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 FAM3BP58499 235 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-223ENST00000493618 BTN1A1Q13410 526 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 CLINT1Q14677 625 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 MIR17HGQ75NE6 70 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 ZNF575Q86XF7 245 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 TMEM14CQ9P0S9 112 aa10.22□□□□□ -0.77
ATG4B-223ENST00000493618 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.77
ATG4B-223ENST00000493618 ZNF253O75346 499 aa10.21□□□□□ -0.77
ATG4B-223ENST00000493618 CCL18P55774 89 aa10.21□□□□□ -0.77
ATG4B-223ENST00000493618 CD300CQ08708 224 aa10.21□□□□□ -0.77
ATG4B-223ENST00000493618 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
ATG4B-223ENST00000493618 CHAC2Q8WUX2 184 aa10.21□□□□□ -0.77
ATG4B-223ENST00000493618 GNPNAT1Q96EK6 184 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-223ENST00000493618 IGKV2-40A0A087WW87 121 aaPredicted RBP10.2□□□□□ -0.78
ATG4B-223ENST00000493618 C7orf71A4D174 169 aa10.2□□□□□ -0.78
ATG4B-223ENST00000493618 H0YIZ8 118 aa10.2□□□□□ -0.78
ATG4B-223ENST00000493618 MPDU1O75352 247 aa10.2□□□□□ -0.78
ATG4B-223ENST00000493618 UPK1BO75841 260 aa10.2□□□□□ -0.78
ATG4B-223ENST00000493618 IGKV2D-40P01614 121 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms