RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TAS2R46P59540 309 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 PRCDQ00LT1 54 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 FAM74A3Q4VXF1 159 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 C6orf226Q5I0X4 101 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 PSMG4Q5JS54 123 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 ACTL10Q5JWF8 245 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SPANXN2Q5MJ10 180 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 PRSS54Q6PEW0 395 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 Q6ZQT7 251 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 RNF182Q8N6D2 247 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 Q8N9L7 120 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 OR51G1Q8NGK1 321 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 GLYATL2Q8WU03 294 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 FAM104AQ969W3 186 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 DIRAS2Q96HU8 199 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 USMG5Q96IX5 58 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 RNF5Q99942 180 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 PBDC1Q9BVG4 233 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 MRPS26Q9BYN8 205 aaKnown RBP1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SLIRPQ9GZT3 109 aaKnown RBP1.97□□□□□ -2.09
PTCD3-218ENST00000493430 NXF2Q9GZY0 626 aaKnown RBP1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SLC35B3Q9H1N7 401 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 MS4A6AQ9H2W1 248 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 RBKSQ9H477 322 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 NAA60Q9H7X0 242 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 TMEM14BQ9NUH8 114 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 MCUBQ9NWR8 336 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SLC2A8Q9NY64 477 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 XCL2Q9UBD3 114 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 MTFP1Q9UDX5 166 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SMPXQ9UHP9 88 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 PAIP2BQ9ULR5 123 aaKnown RBP1.97□□□□□ -2.09
PTCD3-218ENST00000493430 RFNGQ9Y644 331 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 KIAA1109Q2LD37 5005 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 DNAH17Q9UFH2 4485 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 ANKRD20A5PA0PJZ0 165 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 CRYM-AS1A6NIL9 109 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 ZFP92A6NM28 416 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 CEBPZOSA8MTT3 80 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 RBFOX2O43251 390 aaKnown RBP eCLIP1.96□□□□□ -2.13e-7■□□□□ 9.8
PTCD3-218ENST00000493430 MRPS14O60783 128 aaKnown RBP1.96□□□□□ -2.1
PTCD3-218ENST00000493430 TMEM50AO95807 157 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 CD74P04233 296 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 IL4P05112 153 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 CTXN2P0C2S0 81 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 IGLC1P0CG04 106 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 STAG3L3P0CL85 134 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 HTN3P15516 51 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 PTBP1P26599 531 aaKnown RBP eCLIP1.96□□□□□ -2.17e-11■■■■■ 35.2
PTCD3-218ENST00000493430 BTCP35070 178 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 RORCP51449 518 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 KRTAP10-10P60014 251 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 HSPE1P61604 102 aaKnown RBP1.96□□□□□ -2.1
PTCD3-218ENST00000493430 RRAS2P62070 204 aaPredicted RBP1.96□□□□□ -2.1
PTCD3-218ENST00000493430 PPP1R1AQ13522 171 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 SLC16A13Q7RTY0 426 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 BAP18Q8IXM2 172 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 Q8NAQ8 132 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 TMEM229BQ8NBD8 167 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 OR4C5Q8NGB2 326 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 OR11H2Q8NH07 326 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 MCFD2Q8NI22 146 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 VN1R17PQ8TDU5 208 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 SMIM4Q8WVI0 70 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 SEC22CQ9BRL7 303 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 SLC25A39Q9BZJ4 359 aaPredicted RBP1.96□□□□□ -2.1
PTCD3-218ENST00000493430 TMEM222Q9H0R3 208 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 DAZ1Q9NQZ3 744 aaKnown RBP1.96□□□□□ -2.1
PTCD3-218ENST00000493430 COPZ2Q9P299 210 aa1.96□□□□□ -2.1
PTCD3-218ENST00000493430 DYNC1H1Q14204 4646 aaKnown RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 PKD1P98161 4303 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 DNAH2Q9P225 4427 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRAV12-2A0A075B6T6 113 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRAV6A0A075B6T7 132 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 A0A0A6YYH2 397 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRBV7-1A0A0A6YYK4 115 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRAV8-2A0A0B4J237 113 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRAV5A0A0B4J249 113 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRBV7-9A0A0J9YWB2 115 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 A6NJ64 397 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 IGLL5B9A064 214 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 GABARAPH6UMI1 98 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 M0R2Z0 102 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SLC17A3O00476 420 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 NDUFA4O00483 81 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SSSCA1O60232 199 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 CREBL2O60519 120 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SIX6O95475 246 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 IFNA6P05013 189 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 AKAIN1P0CW23 69 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 HIST1H1BP16401 226 aaKnown RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 NPY1RP25929 384 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 CBX5P45973 191 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TAS2R19P59542 299 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 RND3P61587 244 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 POLR2GP62487 172 aaKnown RBP eCLIP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 HAMPP81172 84 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SLC38A11Q08AI6 406 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 DHRS2Q13268 280 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SPINK13Q1W4C9 94 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms