RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 ANXA3P12429 323 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 GPX4P36969 197 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-214ENST00000492858 KIR3DS1Q14943 382 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 Q6ZTI0 123 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 LGI3Q8N145 548 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 OR4D5Q8NGN0 318 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-214ENST00000492858 TRGV9Q99603 122 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 LY96Q9Y6Y9 160 aa8.13□□□□□ -1.11
GPNMB-214ENST00000492858 OXTP01178 125 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 IL15RAQ13261 267 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 Q6ZNX1 250 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 GPR82Q96P67 336 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 PRR13Q9NZ81 148 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 ICOSQ9Y6W8 199 aa8.12□□□□□ -1.11
GPNMB-214ENST00000492858 LRP2P98164 4655 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 TRGV2A0A075B6R0 118 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 IGKV1OR2-108A0A075B7D4 117 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 ORM2P19652 201 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 TMEM268Q5VZI3 342 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 GGNBP1Q5YKI7 109 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 LYZL2Q7Z4W2 148 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 DTD1Q8TEA8 209 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 C20orf144Q9BQM9 153 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 SEC22CQ9BRL7 303 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 LINC00467Q9BRT7 94 aa8.11□□□□□ -1.11
GPNMB-214ENST00000492858 PAX4O43316 350 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 CFDP00746 253 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-214ENST00000492858 SULT1A3P0DMM9 295 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 SULT1A4P0DMN0 295 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 EVI2AP22794 236 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 VAMP1P23763 118 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
GPNMB-214ENST00000492858 PSG3Q16557 428 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 C4orf46Q504U0 113 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-214ENST00000492858 LYPD5Q6UWN5 251 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 C12orf45Q8N5I9 185 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-214ENST00000492858 TMEM147Q9BVK8 224 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 PARD6GQ9BYG4 376 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-214ENST00000492858 RBKSQ9H477 322 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 CACFD1Q9UGQ2 172 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 ALG5Q9Y673 324 aa8.1□□□□□ -1.11
GPNMB-214ENST00000492858 LRCOL1A6NCL2 159 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 PSCAO43653 123 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 C1QBP02746 253 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 CXCL3P19876 107 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 GATA2P23769 480 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-214ENST00000492858 ID3Q02535 119 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 GFI1BQ5VTD9 330 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 THAP8Q8NA92 274 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 CHAC2Q8WUX2 184 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 RPUSD4Q96CM3 377 aaKnown RBP8.09□□□□□ -1.11
GPNMB-214ENST00000492858 GPN1Q9HCN4 374 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-214ENST00000492858 HSPB7Q9UBY9 170 aa8.09□□□□□ -1.11
GPNMB-214ENST00000492858 K7EP13 123 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 ZNF324O75467 553 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-214ENST00000492858 ATP5IP56385 69 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-214ENST00000492858 SMCO1Q147U7 214 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 TMEM182Q6ZP80 229 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-214ENST00000492858 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 Q8N814 137 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 BPIFCQ8NFQ6 507 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 LRRC20Q8TCA0 184 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 FUT9Q9Y231 359 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
GPNMB-214ENST00000492858 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 H3BRN7 92 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 J3KRW8 73 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 CRYGDP07320 174 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 RPL7P18124 248 aaKnown RBP8.07□□□□□ -1.12
GPNMB-214ENST00000492858 S100A7P31151 101 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 Q6ZSA8 131 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 C11orf1Q9H5F2 150 aa8.07□□□□□ -1.12
GPNMB-214ENST00000492858 PAIP2BQ9ULR5 123 aaKnown RBP8.07□□□□□ -1.12
GPNMB-214ENST00000492858 TRAV12-3A0A0B4J271 114 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 IGHV3-53P01767 116 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 HOXB5P09067 269 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 H2BFSP57053 126 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 RAB11AP62491 216 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 MRPL23Q16540 153 aaKnown RBP8.06□□□□□ -1.12
GPNMB-214ENST00000492858 NEGR1Q7Z3B1 354 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 C2orf50Q96LR7 162 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 GSN-AS1Q9NRJ2 163 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 PRO0255Q9UI72 69 aa8.06□□□□□ -1.12
GPNMB-214ENST00000492858 A0A087X0K7 114 aa8.05□□□□□ -1.12
GPNMB-214ENST00000492858 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-214ENST00000492858 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
GPNMB-214ENST00000492858 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-214ENST00000492858 OR1S1Q8NH92 325 aa8.05□□□□□ -1.12
GPNMB-214ENST00000492858 ASB13Q8WXK3 278 aa8.05□□□□□ -1.12
GPNMB-214ENST00000492858 PYGO2Q9BRQ0 406 aa8.05□□□□□ -1.12
GPNMB-214ENST00000492858 NMES1Q9C002 83 aa8.05□□□□□ -1.12
GPNMB-214ENST00000492858 IAPPP10997 89 aa8.04□□□□□ -1.12
GPNMB-214ENST00000492858 CRYBA4P53673 196 aa8.04□□□□□ -1.12
GPNMB-214ENST00000492858 RAP2BP61225 183 aa8.04□□□□□ -1.12
GPNMB-214ENST00000492858 RRAS2P62070 204 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-214ENST00000492858 ZNF680Q8NEM1 530 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms